Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm44428-201ENSMUST00000204474 874 ntBASIC22.88■■□□□ 1.25
Sh3rf3Q8C120 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Sh3rf3Q8C120 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sh3rf3Q8C120 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Sh3rf3Q8C120 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Sh3rf3Q8C120 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sh3rf3Q8C120 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sh3rf3Q8C120 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sh3rf3Q8C120 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3rf3Q8C120 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Sh3rf3Q8C120 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3rf3Q8C120 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3rf3Q8C120 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sh3rf3Q8C120 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sh3rf3Q8C120 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.83■■□□□ 1.25
Sh3rf3Q8C120 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Sh3rf3Q8C120 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Sh3rf3Q8C120 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Sh3rf3Q8C120 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Sh3rf3Q8C120 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Sh3rf3Q8C120 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Sh3rf3Q8C120 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.81■■□□□ 1.24
Sh3rf3Q8C120 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Sh3rf3Q8C120 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Sh3rf3Q8C120 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.8■■□□□ 1.24
Sh3rf3Q8C120 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sh3rf3Q8C120 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Sh3rf3Q8C120 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Sh3rf3Q8C120 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Sh3rf3Q8C120 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.78■■□□□ 1.24
Sh3rf3Q8C120 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3rf3Q8C120 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Sh3rf3Q8C120 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3rf3Q8C120 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3rf3Q8C120 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Sh3rf3Q8C120 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sh3rf3Q8C120 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.76■■□□□ 1.23
Sh3rf3Q8C120 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sh3rf3Q8C120 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sh3rf3Q8C120 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sh3rf3Q8C120 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Sh3rf3Q8C120 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3rf3Q8C120 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3rf3Q8C120 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Sh3rf3Q8C120 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Sh3rf3Q8C120 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Sh3rf3Q8C120 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.73■■□□□ 1.23
Sh3rf3Q8C120 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.73■■□□□ 1.23
Sh3rf3Q8C120 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Sh3rf3Q8C120 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Mir6538-201ENSMUST00000183713 110 ntBASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sh3rf3Q8C120 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Sh3rf3Q8C120 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Sh3rf3Q8C120 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
Sh3rf3Q8C120 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3rf3Q8C120 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3rf3Q8C120 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3rf3Q8C120 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3rf3Q8C120 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf3Q8C120 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf3Q8C120 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf3Q8C120 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.69■■□□□ 1.22
Sh3rf3Q8C120 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf3Q8C120 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3rf3Q8C120 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms