Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Scfd1Q8BRF7 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Scfd1Q8BRF7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Scfd1Q8BRF7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Scfd1Q8BRF7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Scfd1Q8BRF7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC25.36■■□□□ 1.65
Scfd1Q8BRF7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Scfd1Q8BRF7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Scfd1Q8BRF7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Scfd1Q8BRF7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Scfd1Q8BRF7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Scfd1Q8BRF7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
Scfd1Q8BRF7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Scfd1Q8BRF7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Scfd1Q8BRF7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Scfd1Q8BRF7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.35■■□□□ 1.65
Scfd1Q8BRF7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Scfd1Q8BRF7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Scfd1Q8BRF7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Scfd1Q8BRF7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Scfd1Q8BRF7 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.34■■□□□ 1.65
Scfd1Q8BRF7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Scfd1Q8BRF7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Scfd1Q8BRF7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25.34■■□□□ 1.65
Scfd1Q8BRF7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Scfd1Q8BRF7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Scfd1Q8BRF7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC25.33■■□□□ 1.65
Scfd1Q8BRF7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Scfd1Q8BRF7 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC25.33■■□□□ 1.65
Scfd1Q8BRF7 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Scfd1Q8BRF7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Scfd1Q8BRF7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Scfd1Q8BRF7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Scfd1Q8BRF7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Scfd1Q8BRF7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Scfd1Q8BRF7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Scfd1Q8BRF7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Scfd1Q8BRF7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC25.32■■□□□ 1.64
Scfd1Q8BRF7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Scfd1Q8BRF7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Scfd1Q8BRF7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Scfd1Q8BRF7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Scfd1Q8BRF7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Scfd1Q8BRF7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Scfd1Q8BRF7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
Scfd1Q8BRF7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Scfd1Q8BRF7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Scfd1Q8BRF7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Scfd1Q8BRF7 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.29■■□□□ 1.64
Scfd1Q8BRF7 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.29■■□□□ 1.64
Scfd1Q8BRF7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Scfd1Q8BRF7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Scfd1Q8BRF7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Scfd1Q8BRF7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Scfd1Q8BRF7 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Scfd1Q8BRF7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Scfd1Q8BRF7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.28■■□□□ 1.64
Scfd1Q8BRF7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Scfd1Q8BRF7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Scfd1Q8BRF7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Scfd1Q8BRF7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Scfd1Q8BRF7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Scfd1Q8BRF7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Scfd1Q8BRF7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Scfd1Q8BRF7 Gm22567-201ENSMUST00000175542 342 ntBASIC25.27■■□□□ 1.64
Scfd1Q8BRF7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC25.27■■□□□ 1.64
Scfd1Q8BRF7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Scfd1Q8BRF7 Gm28731-201ENSMUST00000185564 1569 ntBASIC25.27■■□□□ 1.64
Scfd1Q8BRF7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Scfd1Q8BRF7 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.26■■□□□ 1.63
Scfd1Q8BRF7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Scfd1Q8BRF7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Scfd1Q8BRF7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Scfd1Q8BRF7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Scfd1Q8BRF7 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Scfd1Q8BRF7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Scfd1Q8BRF7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.24■■□□□ 1.63
Scfd1Q8BRF7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Scfd1Q8BRF7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
Scfd1Q8BRF7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Scfd1Q8BRF7 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Scfd1Q8BRF7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Scfd1Q8BRF7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.23■■□□□ 1.63
Scfd1Q8BRF7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
Scfd1Q8BRF7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Scfd1Q8BRF7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Scfd1Q8BRF7 Gm10232-201ENSMUST00000089221 720 ntBASIC25.23■■□□□ 1.63
Scfd1Q8BRF7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC25.23■■□□□ 1.63
Scfd1Q8BRF7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Scfd1Q8BRF7 Rps24-207ENSMUST00000224568 714 ntBASIC25.22■■□□□ 1.63
Scfd1Q8BRF7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Scfd1Q8BRF7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Scfd1Q8BRF7 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Scfd1Q8BRF7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Scfd1Q8BRF7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Scfd1Q8BRF7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC25.21■■□□□ 1.63
Scfd1Q8BRF7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC25.21■■□□□ 1.63
Scfd1Q8BRF7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Scfd1Q8BRF7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Scfd1Q8BRF7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms