Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf18Q8BM39 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf18Q8BM39 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Prpf18Q8BM39 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Prpf18Q8BM39 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.74■□□□□ 0.91
Prpf18Q8BM39 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Prpf18Q8BM39 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Prpf18Q8BM39 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf18Q8BM39 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf18Q8BM39 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf18Q8BM39 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf18Q8BM39 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf18Q8BM39 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Prpf18Q8BM39 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf18Q8BM39 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.72■□□□□ 0.91
Prpf18Q8BM39 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Prpf18Q8BM39 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Prpf18Q8BM39 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf18Q8BM39 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Prpf18Q8BM39 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf18Q8BM39 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Prpf18Q8BM39 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Prpf18Q8BM39 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf18Q8BM39 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf18Q8BM39 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf18Q8BM39 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Prpf18Q8BM39 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf18Q8BM39 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Prpf18Q8BM39 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf18Q8BM39 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Prpf18Q8BM39 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Prpf18Q8BM39 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Prpf18Q8BM39 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.69■□□□□ 0.9
Prpf18Q8BM39 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf18Q8BM39 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Prpf18Q8BM39 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Prpf18Q8BM39 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf18Q8BM39 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf18Q8BM39 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf18Q8BM39 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Prpf18Q8BM39 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Prpf18Q8BM39 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Prpf18Q8BM39 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf18Q8BM39 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prpf18Q8BM39 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prpf18Q8BM39 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Prpf18Q8BM39 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Prpf18Q8BM39 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Prpf18Q8BM39 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prpf18Q8BM39 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.65■□□□□ 0.9
Prpf18Q8BM39 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Prpf18Q8BM39 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prpf18Q8BM39 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Prpf18Q8BM39 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.63■□□□□ 0.89
Prpf18Q8BM39 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf18Q8BM39 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf18Q8BM39 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Prpf18Q8BM39 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf18Q8BM39 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.63■□□□□ 0.89
Prpf18Q8BM39 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prpf18Q8BM39 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf18Q8BM39 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf18Q8BM39 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prpf18Q8BM39 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf18Q8BM39 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf18Q8BM39 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf18Q8BM39 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf18Q8BM39 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Prpf18Q8BM39 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf18Q8BM39 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prpf18Q8BM39 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Prpf18Q8BM39 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Prpf18Q8BM39 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf18Q8BM39 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf18Q8BM39 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.6■□□□□ 0.89
Prpf18Q8BM39 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf18Q8BM39 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prpf18Q8BM39 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Prpf18Q8BM39 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf18Q8BM39 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf18Q8BM39 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.59■□□□□ 0.89
Prpf18Q8BM39 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf18Q8BM39 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.59■□□□□ 0.89
Prpf18Q8BM39 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Prpf18Q8BM39 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prpf18Q8BM39 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf18Q8BM39 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
Prpf18Q8BM39 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prpf18Q8BM39 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Prpf18Q8BM39 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Prpf18Q8BM39 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Prpf18Q8BM39 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Prpf18Q8BM39 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf18Q8BM39 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
Prpf18Q8BM39 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Prpf18Q8BM39 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf18Q8BM39 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf18Q8BM39 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Prpf18Q8BM39 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf18Q8BM39 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms