Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LDLRAD3Q86YD5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LDLRAD3Q86YD5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LDLRAD3Q86YD5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LDLRAD3Q86YD5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LDLRAD3Q86YD5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LDLRAD3Q86YD5 RARRES2P2-201ENST00000394842 485 ntBASIC20.47■□□□□ 0.87
LDLRAD3Q86YD5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LDLRAD3Q86YD5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LDLRAD3Q86YD5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LDLRAD3Q86YD5 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.46■□□□□ 0.87
LDLRAD3Q86YD5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LDLRAD3Q86YD5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.46■□□□□ 0.87
LDLRAD3Q86YD5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
LDLRAD3Q86YD5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
LDLRAD3Q86YD5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LDLRAD3Q86YD5 RNF126P1-201ENST00000567452 1320 ntBASIC20.46■□□□□ 0.87
LDLRAD3Q86YD5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LDLRAD3Q86YD5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LDLRAD3Q86YD5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LDLRAD3Q86YD5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.45■□□□□ 0.86
LDLRAD3Q86YD5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LDLRAD3Q86YD5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.45■□□□□ 0.86
LDLRAD3Q86YD5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LDLRAD3Q86YD5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.45■□□□□ 0.86
LDLRAD3Q86YD5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
LDLRAD3Q86YD5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.45■□□□□ 0.86
LDLRAD3Q86YD5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LDLRAD3Q86YD5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LDLRAD3Q86YD5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.44■□□□□ 0.86
LDLRAD3Q86YD5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.44■□□□□ 0.86
LDLRAD3Q86YD5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LDLRAD3Q86YD5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.43■□□□□ 0.86
LDLRAD3Q86YD5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.43■□□□□ 0.86
LDLRAD3Q86YD5 AC022413.1-201ENST00000624602 984 ntBASIC20.43■□□□□ 0.86
LDLRAD3Q86YD5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.43■□□□□ 0.86
LDLRAD3Q86YD5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.43■□□□□ 0.86
LDLRAD3Q86YD5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LDLRAD3Q86YD5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.43■□□□□ 0.86
LDLRAD3Q86YD5 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LDLRAD3Q86YD5 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LDLRAD3Q86YD5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LDLRAD3Q86YD5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDLRAD3Q86YD5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LDLRAD3Q86YD5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.42■□□□□ 0.86
LDLRAD3Q86YD5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDLRAD3Q86YD5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.41■□□□□ 0.86
LDLRAD3Q86YD5 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.41■□□□□ 0.86
LDLRAD3Q86YD5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDLRAD3Q86YD5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LDLRAD3Q86YD5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDLRAD3Q86YD5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDLRAD3Q86YD5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LDLRAD3Q86YD5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDLRAD3Q86YD5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LDLRAD3Q86YD5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LDLRAD3Q86YD5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LDLRAD3Q86YD5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.4■□□□□ 0.86
LDLRAD3Q86YD5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.39■□□□□ 0.86
LDLRAD3Q86YD5 MIR219A2-201ENST00000608502 1504 ntBASIC20.39■□□□□ 0.85
LDLRAD3Q86YD5 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LDLRAD3Q86YD5 ABHD17AP5-201ENST00000580133 923 ntBASIC20.39■□□□□ 0.85
LDLRAD3Q86YD5 AC133561.1-201ENST00000568600 2415 ntBASIC20.39■□□□□ 0.85
LDLRAD3Q86YD5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LDLRAD3Q86YD5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LDLRAD3Q86YD5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
LDLRAD3Q86YD5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.38■□□□□ 0.85
LDLRAD3Q86YD5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.38■□□□□ 0.85
LDLRAD3Q86YD5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAD3Q86YD5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAD3Q86YD5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAD3Q86YD5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LDLRAD3Q86YD5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LDLRAD3Q86YD5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 AC142472.1-201ENST00000612013 1741 ntBASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LDLRAD3Q86YD5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAD3Q86YD5 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAD3Q86YD5 WHAMMP3-201ENST00000611636 1609 ntBASIC20.36■□□□□ 0.85
LDLRAD3Q86YD5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAD3Q86YD5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAD3Q86YD5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAD3Q86YD5 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAD3Q86YD5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.36■□□□□ 0.85
LDLRAD3Q86YD5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LDLRAD3Q86YD5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LDLRAD3Q86YD5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LDLRAD3Q86YD5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms