Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SYVN1Q86TM6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SYVN1Q86TM6 AC126177.7-201ENST00000547904 679 ntBASIC23.76■■□□□ 1.39
SYVN1Q86TM6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SYVN1Q86TM6 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SYVN1Q86TM6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.75■■□□□ 1.39
SYVN1Q86TM6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SYVN1Q86TM6 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SYVN1Q86TM6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SYVN1Q86TM6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
SYVN1Q86TM6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.73■■□□□ 1.39
SYVN1Q86TM6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.73■■□□□ 1.39
SYVN1Q86TM6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.73■■□□□ 1.39
SYVN1Q86TM6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SYVN1Q86TM6 AC092296.2-201ENST00000589470 999 ntBASIC23.73■■□□□ 1.39
SYVN1Q86TM6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYVN1Q86TM6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYVN1Q86TM6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYVN1Q86TM6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
SYVN1Q86TM6 ERN1-208ENST00000606895 2068 ntBASIC23.72■■□□□ 1.39
SYVN1Q86TM6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SYVN1Q86TM6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.72■■□□□ 1.39
SYVN1Q86TM6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SYVN1Q86TM6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.72■■□□□ 1.39
SYVN1Q86TM6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SYVN1Q86TM6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SYVN1Q86TM6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SYVN1Q86TM6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.71■■□□□ 1.39
SYVN1Q86TM6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SYVN1Q86TM6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.71■■□□□ 1.39
SYVN1Q86TM6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SYVN1Q86TM6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SYVN1Q86TM6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.7■■□□□ 1.38
SYVN1Q86TM6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.7■■□□□ 1.38
SYVN1Q86TM6 ECEL1P2-201ENST00000461596 1295 ntBASIC23.7■■□□□ 1.38
SYVN1Q86TM6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SYVN1Q86TM6 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SYVN1Q86TM6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.69■■□□□ 1.38
SYVN1Q86TM6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SYVN1Q86TM6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SYVN1Q86TM6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.69■■□□□ 1.38
SYVN1Q86TM6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SYVN1Q86TM6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.68■■□□□ 1.38
SYVN1Q86TM6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SYVN1Q86TM6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SYVN1Q86TM6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SYVN1Q86TM6 U85056.1-201ENST00000616429 682 ntBASIC23.67■■□□□ 1.38
SYVN1Q86TM6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.67■■□□□ 1.38
SYVN1Q86TM6 AC010501.1-201ENST00000606270 1962 ntBASIC23.67■■□□□ 1.38
SYVN1Q86TM6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SYVN1Q86TM6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.66■■□□□ 1.38
SYVN1Q86TM6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SYVN1Q86TM6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.66■■□□□ 1.38
SYVN1Q86TM6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SYVN1Q86TM6 AL359258.2-201ENST00000564063 1566 ntBASIC23.65■■□□□ 1.38
SYVN1Q86TM6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYVN1Q86TM6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYVN1Q86TM6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SYVN1Q86TM6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYVN1Q86TM6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYVN1Q86TM6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SYVN1Q86TM6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
SYVN1Q86TM6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SYVN1Q86TM6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.64■■□□□ 1.37
SYVN1Q86TM6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SYVN1Q86TM6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.63■■□□□ 1.37
SYVN1Q86TM6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SYVN1Q86TM6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYVN1Q86TM6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.62■■□□□ 1.37
SYVN1Q86TM6 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.62■■□□□ 1.37
SYVN1Q86TM6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
SYVN1Q86TM6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SYVN1Q86TM6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SYVN1Q86TM6 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.62■■□□□ 1.37
SYVN1Q86TM6 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYVN1Q86TM6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.62■■□□□ 1.37
SYVN1Q86TM6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYVN1Q86TM6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
SYVN1Q86TM6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SYVN1Q86TM6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SYVN1Q86TM6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SYVN1Q86TM6 AL359504.2-201ENST00000605506 1601 ntBASIC23.6■■□□□ 1.37
SYVN1Q86TM6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SYVN1Q86TM6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SYVN1Q86TM6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SYVN1Q86TM6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SYVN1Q86TM6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SYVN1Q86TM6 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SYVN1Q86TM6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SYVN1Q86TM6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SYVN1Q86TM6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.59■■□□□ 1.37
SYVN1Q86TM6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
SYVN1Q86TM6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
SYVN1Q86TM6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SYVN1Q86TM6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
SYVN1Q86TM6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SYVN1Q86TM6 AL033527.3-201ENST00000566366 1196 ntBASIC23.58■■□□□ 1.37
SYVN1Q86TM6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
SYVN1Q86TM6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SYVN1Q86TM6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 637.9 ms