Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ttc28Q80XJ3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.86■□□□□ 0.61
Ttc28Q80XJ3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ttc28Q80XJ3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc28Q80XJ3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Ttc28Q80XJ3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.85■□□□□ 0.61
Ttc28Q80XJ3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc28Q80XJ3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.84■□□□□ 0.61
Ttc28Q80XJ3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ttc28Q80XJ3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ttc28Q80XJ3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc28Q80XJ3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.82■□□□□ 0.6
Ttc28Q80XJ3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc28Q80XJ3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.82■□□□□ 0.6
Ttc28Q80XJ3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc28Q80XJ3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc28Q80XJ3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc28Q80XJ3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Ttc28Q80XJ3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
Ttc28Q80XJ3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc28Q80XJ3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc28Q80XJ3 Gm22238-201ENSMUST00000175222 88 ntBASIC18.8■□□□□ 0.6
Ttc28Q80XJ3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.8■□□□□ 0.6
Ttc28Q80XJ3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ttc28Q80XJ3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc28Q80XJ3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc28Q80XJ3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.78■□□□□ 0.6
Ttc28Q80XJ3 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.78■□□□□ 0.6
Ttc28Q80XJ3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc28Q80XJ3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc28Q80XJ3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc28Q80XJ3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.78■□□□□ 0.6
Ttc28Q80XJ3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc28Q80XJ3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ttc28Q80XJ3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.77■□□□□ 0.6
Ttc28Q80XJ3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.77■□□□□ 0.6
Ttc28Q80XJ3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ttc28Q80XJ3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ttc28Q80XJ3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ttc28Q80XJ3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ttc28Q80XJ3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.77■□□□□ 0.59
Ttc28Q80XJ3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ttc28Q80XJ3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ttc28Q80XJ3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ttc28Q80XJ3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ttc28Q80XJ3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ttc28Q80XJ3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ttc28Q80XJ3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ttc28Q80XJ3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.75■□□□□ 0.59
Ttc28Q80XJ3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.75■□□□□ 0.59
Ttc28Q80XJ3 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.75■□□□□ 0.59
Ttc28Q80XJ3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.75■□□□□ 0.59
Ttc28Q80XJ3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ttc28Q80XJ3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ttc28Q80XJ3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ttc28Q80XJ3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ttc28Q80XJ3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ttc28Q80XJ3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ttc28Q80XJ3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ttc28Q80XJ3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.73■□□□□ 0.59
Ttc28Q80XJ3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.72■□□□□ 0.59
Ttc28Q80XJ3 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc28Q80XJ3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.72■□□□□ 0.59
Ttc28Q80XJ3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc28Q80XJ3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc28Q80XJ3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ttc28Q80XJ3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.72■□□□□ 0.59
Ttc28Q80XJ3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc28Q80XJ3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc28Q80XJ3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ttc28Q80XJ3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Ttc28Q80XJ3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ttc28Q80XJ3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc28Q80XJ3 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.7■□□□□ 0.58
Ttc28Q80XJ3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc28Q80XJ3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ttc28Q80XJ3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc28Q80XJ3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc28Q80XJ3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc28Q80XJ3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ttc28Q80XJ3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc28Q80XJ3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc28Q80XJ3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc28Q80XJ3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ttc28Q80XJ3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc28Q80XJ3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.68■□□□□ 0.58
Ttc28Q80XJ3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ttc28Q80XJ3 Gm27454-201ENSMUST00000185090 204 ntBASIC18.68■□□□□ 0.58
Ttc28Q80XJ3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.68■□□□□ 0.58
Ttc28Q80XJ3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.68■□□□□ 0.58
Ttc28Q80XJ3 Gm40881-201ENSMUST00000223397 166 ntBASIC18.67■□□□□ 0.58
Ttc28Q80XJ3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ttc28Q80XJ3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ttc28Q80XJ3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Ttc28Q80XJ3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ttc28Q80XJ3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ttc28Q80XJ3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ttc28Q80XJ3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ttc28Q80XJ3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ttc28Q80XJ3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms