Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00336Q6ZUF6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00336Q6ZUF6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC00336Q6ZUF6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.23■□□□□ 0.19
LINC00336Q6ZUF6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00336Q6ZUF6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC00336Q6ZUF6 AL359504.2-201ENST00000605506 1601 ntBASIC16.23■□□□□ 0.19
LINC00336Q6ZUF6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.22■□□□□ 0.19
LINC00336Q6ZUF6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00336Q6ZUF6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
LINC00336Q6ZUF6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00336Q6ZUF6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC00336Q6ZUF6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.22■□□□□ 0.19
LINC00336Q6ZUF6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC00336Q6ZUF6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC00336Q6ZUF6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC00336Q6ZUF6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00336Q6ZUF6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC00336Q6ZUF6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC00336Q6ZUF6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00336Q6ZUF6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00336Q6ZUF6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00336Q6ZUF6 KRT18P24-201ENST00000344739 1156 ntBASIC16.2■□□□□ 0.18
LINC00336Q6ZUF6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00336Q6ZUF6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.2■□□□□ 0.18
LINC00336Q6ZUF6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00336Q6ZUF6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00336Q6ZUF6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.2■□□□□ 0.18
LINC00336Q6ZUF6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.2■□□□□ 0.18
LINC00336Q6ZUF6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00336Q6ZUF6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
LINC00336Q6ZUF6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00336Q6ZUF6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00336Q6ZUF6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00336Q6ZUF6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00336Q6ZUF6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00336Q6ZUF6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
LINC00336Q6ZUF6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.19■□□□□ 0.18
LINC00336Q6ZUF6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LINC00336Q6ZUF6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00336Q6ZUF6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
LINC00336Q6ZUF6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00336Q6ZUF6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC00336Q6ZUF6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00336Q6ZUF6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
LINC00336Q6ZUF6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.18■□□□□ 0.18
LINC00336Q6ZUF6 AC137630.3-201ENST00000607245 391 ntBASIC16.18■□□□□ 0.18
LINC00336Q6ZUF6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00336Q6ZUF6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00336Q6ZUF6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00336Q6ZUF6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LINC00336Q6ZUF6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00336Q6ZUF6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00336Q6ZUF6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00336Q6ZUF6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.17■□□□□ 0.18
LINC00336Q6ZUF6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LINC00336Q6ZUF6 TSPY9P-201ENST00000440215 945 ntBASIC16.17■□□□□ 0.18
LINC00336Q6ZUF6 TSPY11P-201ENST00000442607 1045 ntBASIC16.17■□□□□ 0.18
LINC00336Q6ZUF6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.17■□□□□ 0.18
LINC00336Q6ZUF6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00336Q6ZUF6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LINC00336Q6ZUF6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LINC00336Q6ZUF6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LINC00336Q6ZUF6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00336Q6ZUF6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.16■□□□□ 0.18
LINC00336Q6ZUF6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00336Q6ZUF6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
LINC00336Q6ZUF6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC16.16■□□□□ 0.18
LINC00336Q6ZUF6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00336Q6ZUF6 AP002414.2-202ENST00000590929 1450 ntBASIC16.16■□□□□ 0.18
LINC00336Q6ZUF6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
LINC00336Q6ZUF6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00336Q6ZUF6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LINC00336Q6ZUF6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00336Q6ZUF6 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.15■□□□□ 0.18
LINC00336Q6ZUF6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LINC00336Q6ZUF6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00336Q6ZUF6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
LINC00336Q6ZUF6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LINC00336Q6ZUF6 AC021242.3-201ENST00000607598 1377 ntBASIC16.14■□□□□ 0.17
LINC00336Q6ZUF6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
LINC00336Q6ZUF6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00336Q6ZUF6 AL136116.3-201ENST00000402907 1138 ntBASIC16.14■□□□□ 0.17
LINC00336Q6ZUF6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00336Q6ZUF6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.14■□□□□ 0.17
LINC00336Q6ZUF6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.14■□□□□ 0.17
LINC00336Q6ZUF6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.14■□□□□ 0.17
LINC00336Q6ZUF6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC00336Q6ZUF6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00336Q6ZUF6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LINC00336Q6ZUF6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.13■□□□□ 0.17
LINC00336Q6ZUF6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.13■□□□□ 0.17
LINC00336Q6ZUF6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.13■□□□□ 0.17
LINC00336Q6ZUF6 AC131281.2-201ENST00000520478 145 ntBASIC16.13■□□□□ 0.17
LINC00336Q6ZUF6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00336Q6ZUF6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LINC00336Q6ZUF6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC00336Q6ZUF6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00336Q6ZUF6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00336Q6ZUF6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms