Protein–RNA interactions for Protein: Q6NZF1

Zc3h11a, Zinc finger CCCH domain-containing protein 11A, mousemouse

Known RBP Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h11aQ6NZF1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zc3h11aQ6NZF1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Zc3h11aQ6NZF1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zc3h11aQ6NZF1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zc3h11aQ6NZF1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Zc3h11aQ6NZF1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zc3h11aQ6NZF1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.33■■□□□ 1.01
Zc3h11aQ6NZF1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Zc3h11aQ6NZF1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.32■■□□□ 1
Zc3h11aQ6NZF1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3h11aQ6NZF1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.32■■□□□ 1
Zc3h11aQ6NZF1 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.32■■□□□ 1
Zc3h11aQ6NZF1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3h11aQ6NZF1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.32■■□□□ 1
Zc3h11aQ6NZF1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3h11aQ6NZF1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3h11aQ6NZF1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Zc3h11aQ6NZF1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.31■■□□□ 1
Zc3h11aQ6NZF1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.31■■□□□ 1
Zc3h11aQ6NZF1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.31■■□□□ 1
Zc3h11aQ6NZF1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zc3h11aQ6NZF1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Zc3h11aQ6NZF1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Zc3h11aQ6NZF1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Zc3h11aQ6NZF1 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.3■■□□□ 1
Zc3h11aQ6NZF1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zc3h11aQ6NZF1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zc3h11aQ6NZF1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.29■■□□□ 1
Zc3h11aQ6NZF1 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.29■■□□□ 1
Zc3h11aQ6NZF1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.29■■□□□ 1
Zc3h11aQ6NZF1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.29■■□□□ 1
Zc3h11aQ6NZF1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.29■■□□□ 1
Zc3h11aQ6NZF1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zc3h11aQ6NZF1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zc3h11aQ6NZF1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.28■■□□□ 1
Zc3h11aQ6NZF1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zc3h11aQ6NZF1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.28■■□□□ 1
Zc3h11aQ6NZF1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h11aQ6NZF1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.27■■□□□ 1
Zc3h11aQ6NZF1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.27■■□□□ 1
Zc3h11aQ6NZF1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Zc3h11aQ6NZF1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h11aQ6NZF1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.27■■□□□ 1
Zc3h11aQ6NZF1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Zc3h11aQ6NZF1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h11aQ6NZF1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Zc3h11aQ6NZF1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h11aQ6NZF1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h11aQ6NZF1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Zc3h11aQ6NZF1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zc3h11aQ6NZF1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h11aQ6NZF1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.25■□□□□ 0.99
Zc3h11aQ6NZF1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h11aQ6NZF1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h11aQ6NZF1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Zc3h11aQ6NZF1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zc3h11aQ6NZF1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h11aQ6NZF1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zc3h11aQ6NZF1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Zc3h11aQ6NZF1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zc3h11aQ6NZF1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zc3h11aQ6NZF1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.23■□□□□ 0.99
Zc3h11aQ6NZF1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Zc3h11aQ6NZF1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Zc3h11aQ6NZF1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zc3h11aQ6NZF1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zc3h11aQ6NZF1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Zc3h11aQ6NZF1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.22■□□□□ 0.99
Zc3h11aQ6NZF1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3h11aQ6NZF1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Zc3h11aQ6NZF1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3h11aQ6NZF1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Zc3h11aQ6NZF1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.22■□□□□ 0.99
Zc3h11aQ6NZF1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3h11aQ6NZF1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3h11aQ6NZF1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zc3h11aQ6NZF1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h11aQ6NZF1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h11aQ6NZF1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h11aQ6NZF1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h11aQ6NZF1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Zc3h11aQ6NZF1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Zc3h11aQ6NZF1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Zc3h11aQ6NZF1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Zc3h11aQ6NZF1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
Zc3h11aQ6NZF1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h11aQ6NZF1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h11aQ6NZF1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h11aQ6NZF1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h11aQ6NZF1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h11aQ6NZF1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Zc3h11aQ6NZF1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.19■□□□□ 0.98
Zc3h11aQ6NZF1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h11aQ6NZF1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h11aQ6NZF1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3h11aQ6NZF1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3h11aQ6NZF1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3h11aQ6NZF1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3h11aQ6NZF1 Gm10420-201ENSMUST00000121713 882 ntBASIC21.18■□□□□ 0.98
Zc3h11aQ6NZF1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms