Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga7Q6DD96 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga7Q6DD96 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga7Q6DD96 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga7Q6DD96 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga7Q6DD96 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga7Q6DD96 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.21■□□□□ 0.99
Pcdhga7Q6DD96 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga7Q6DD96 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.21■□□□□ 0.99
Pcdhga7Q6DD96 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.21■□□□□ 0.99
Pcdhga7Q6DD96 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.21■□□□□ 0.99
Pcdhga7Q6DD96 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga7Q6DD96 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga7Q6DD96 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga7Q6DD96 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga7Q6DD96 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga7Q6DD96 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhga7Q6DD96 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga7Q6DD96 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga7Q6DD96 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga7Q6DD96 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga7Q6DD96 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga7Q6DD96 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhga7Q6DD96 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga7Q6DD96 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pcdhga7Q6DD96 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga7Q6DD96 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga7Q6DD96 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga7Q6DD96 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga7Q6DD96 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga7Q6DD96 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdhga7Q6DD96 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga7Q6DD96 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga7Q6DD96 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga7Q6DD96 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.16■□□□□ 0.98
Pcdhga7Q6DD96 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhga7Q6DD96 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga7Q6DD96 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga7Q6DD96 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga7Q6DD96 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcdhga7Q6DD96 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga7Q6DD96 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga7Q6DD96 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga7Q6DD96 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga7Q6DD96 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Pcdhga7Q6DD96 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhga7Q6DD96 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhga7Q6DD96 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhga7Q6DD96 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhga7Q6DD96 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga7Q6DD96 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga7Q6DD96 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.13■□□□□ 0.97
Pcdhga7Q6DD96 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga7Q6DD96 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga7Q6DD96 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhga7Q6DD96 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Pcdhga7Q6DD96 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga7Q6DD96 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga7Q6DD96 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.12■□□□□ 0.97
Pcdhga7Q6DD96 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.12■□□□□ 0.97
Pcdhga7Q6DD96 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdhga7Q6DD96 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdhga7Q6DD96 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.11■□□□□ 0.97
Pcdhga7Q6DD96 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga7Q6DD96 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga7Q6DD96 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga7Q6DD96 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdhga7Q6DD96 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga7Q6DD96 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Pcdhga7Q6DD96 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga7Q6DD96 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga7Q6DD96 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga7Q6DD96 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdhga7Q6DD96 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga7Q6DD96 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Pcdhga7Q6DD96 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.09■□□□□ 0.97
Pcdhga7Q6DD96 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga7Q6DD96 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhga7Q6DD96 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhga7Q6DD96 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.08■□□□□ 0.97
Pcdhga7Q6DD96 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhga7Q6DD96 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhga7Q6DD96 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.08■□□□□ 0.97
Pcdhga7Q6DD96 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhga7Q6DD96 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhga7Q6DD96 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhga7Q6DD96 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhga7Q6DD96 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhga7Q6DD96 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga7Q6DD96 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga7Q6DD96 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga7Q6DD96 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga7Q6DD96 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga7Q6DD96 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.07■□□□□ 0.96
Pcdhga7Q6DD96 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.07■□□□□ 0.96
Pcdhga7Q6DD96 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Pcdhga7Q6DD96 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga7Q6DD96 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhga7Q6DD96 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga7Q6DD96 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms