Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
Ltn1Q6A009 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ltn1Q6A009 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ltn1Q6A009 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Ltn1Q6A009 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC26.76■■□□□ 1.87
Ltn1Q6A009 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ltn1Q6A009 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ltn1Q6A009 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Ltn1Q6A009 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ltn1Q6A009 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Ltn1Q6A009 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.75■■□□□ 1.87
Ltn1Q6A009 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ltn1Q6A009 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Ltn1Q6A009 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Ltn1Q6A009 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Ltn1Q6A009 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
Ltn1Q6A009 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Ltn1Q6A009 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Ltn1Q6A009 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ltn1Q6A009 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Ltn1Q6A009 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ltn1Q6A009 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.72■■□□□ 1.87
Ltn1Q6A009 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ltn1Q6A009 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Ltn1Q6A009 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ltn1Q6A009 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ltn1Q6A009 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ltn1Q6A009 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ltn1Q6A009 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ltn1Q6A009 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ltn1Q6A009 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
Ltn1Q6A009 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC26.7■■□□□ 1.86
Ltn1Q6A009 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26.7■■□□□ 1.86
Ltn1Q6A009 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ltn1Q6A009 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ltn1Q6A009 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC26.69■■□□□ 1.86
Ltn1Q6A009 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Ltn1Q6A009 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ltn1Q6A009 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Ltn1Q6A009 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ltn1Q6A009 Etf1-202ENSMUST00000180351 108 ntBASIC26.68■■□□□ 1.86
Ltn1Q6A009 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ltn1Q6A009 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Ltn1Q6A009 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Ltn1Q6A009 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ltn1Q6A009 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ltn1Q6A009 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ltn1Q6A009 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ltn1Q6A009 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ltn1Q6A009 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC26.66■■□□□ 1.86
Ltn1Q6A009 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ltn1Q6A009 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ltn1Q6A009 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.65■■□□□ 1.86
Ltn1Q6A009 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ltn1Q6A009 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ltn1Q6A009 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ltn1Q6A009 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ltn1Q6A009 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC26.65■■□□□ 1.86
Ltn1Q6A009 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ltn1Q6A009 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC26.64■■□□□ 1.86
Ltn1Q6A009 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ltn1Q6A009 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Ltn1Q6A009 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC26.63■■□□□ 1.85
Ltn1Q6A009 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ltn1Q6A009 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ltn1Q6A009 Gm16464-201ENSMUST00000117815 1095 ntBASIC26.63■■□□□ 1.85
Ltn1Q6A009 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Ltn1Q6A009 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Ltn1Q6A009 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC26.62■■□□□ 1.85
Ltn1Q6A009 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
Ltn1Q6A009 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ltn1Q6A009 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ltn1Q6A009 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC26.6■■□□□ 1.85
Ltn1Q6A009 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ltn1Q6A009 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC26.6■■□□□ 1.85
Ltn1Q6A009 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
Ltn1Q6A009 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ltn1Q6A009 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC26.59■■□□□ 1.85
Ltn1Q6A009 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC26.58■■□□□ 1.85
Ltn1Q6A009 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Ltn1Q6A009 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC26.58■■□□□ 1.85
Ltn1Q6A009 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ltn1Q6A009 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ltn1Q6A009 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.58■■□□□ 1.85
Ltn1Q6A009 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ltn1Q6A009 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Ltn1Q6A009 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ltn1Q6A009 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC26.56■■□□□ 1.84
Ltn1Q6A009 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC26.56■■□□□ 1.84
Ltn1Q6A009 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ltn1Q6A009 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Ltn1Q6A009 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ltn1Q6A009 Gm28536-201ENSMUST00000190971 1317 ntBASIC26.56■■□□□ 1.84
Ltn1Q6A009 Gm21956-201ENSMUST00000179946 522 ntBASIC26.56■■□□□ 1.84
Ltn1Q6A009 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ltn1Q6A009 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ltn1Q6A009 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.55■■□□□ 1.84
Ltn1Q6A009 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
Ltn1Q6A009 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ltn1Q6A009 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms