Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.06■□□□□ 0.64
Col7a1Q63870 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col7a1Q63870 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col7a1Q63870 Gm6139-201ENSMUST00000079261 882 ntBASIC19.05■□□□□ 0.64
Col7a1Q63870 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col7a1Q63870 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Col7a1Q63870 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col7a1Q63870 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col7a1Q63870 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col7a1Q63870 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col7a1Q63870 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col7a1Q63870 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.04■□□□□ 0.64
Col7a1Q63870 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Col7a1Q63870 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col7a1Q63870 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.04■□□□□ 0.64
Col7a1Q63870 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col7a1Q63870 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.04■□□□□ 0.64
Col7a1Q63870 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col7a1Q63870 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col7a1Q63870 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.03■□□□□ 0.64
Col7a1Q63870 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col7a1Q63870 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Col7a1Q63870 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col7a1Q63870 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col7a1Q63870 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Col7a1Q63870 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col7a1Q63870 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col7a1Q63870 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col7a1Q63870 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col7a1Q63870 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.01■□□□□ 0.63
Col7a1Q63870 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.01■□□□□ 0.63
Col7a1Q63870 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col7a1Q63870 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col7a1Q63870 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.01■□□□□ 0.63
Col7a1Q63870 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col7a1Q63870 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19■□□□□ 0.63
Col7a1Q63870 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col7a1Q63870 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col7a1Q63870 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Col7a1Q63870 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col7a1Q63870 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col7a1Q63870 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col7a1Q63870 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Col7a1Q63870 Gm28731-201ENSMUST00000185564 1569 ntBASIC19■□□□□ 0.63
Col7a1Q63870 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.99■□□□□ 0.63
Col7a1Q63870 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col7a1Q63870 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Col7a1Q63870 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col7a1Q63870 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col7a1Q63870 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Col7a1Q63870 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col7a1Q63870 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col7a1Q63870 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col7a1Q63870 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col7a1Q63870 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col7a1Q63870 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.98■□□□□ 0.63
Col7a1Q63870 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.98■□□□□ 0.63
Col7a1Q63870 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col7a1Q63870 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col7a1Q63870 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col7a1Q63870 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col7a1Q63870 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Col7a1Q63870 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col7a1Q63870 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col7a1Q63870 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.97■□□□□ 0.63
Col7a1Q63870 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col7a1Q63870 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col7a1Q63870 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col7a1Q63870 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.96■□□□□ 0.63
Col7a1Q63870 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col7a1Q63870 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.96■□□□□ 0.63
Col7a1Q63870 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Col7a1Q63870 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col7a1Q63870 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col7a1Q63870 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col7a1Q63870 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col7a1Q63870 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Col7a1Q63870 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col7a1Q63870 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col7a1Q63870 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.94■□□□□ 0.62
Col7a1Q63870 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col7a1Q63870 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col7a1Q63870 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col7a1Q63870 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Col7a1Q63870 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.93■□□□□ 0.62
Col7a1Q63870 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.93■□□□□ 0.62
Col7a1Q63870 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col7a1Q63870 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col7a1Q63870 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
Col7a1Q63870 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Col7a1Q63870 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Col7a1Q63870 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Col7a1Q63870 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.92■□□□□ 0.62
Col7a1Q63870 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.92■□□□□ 0.62
Col7a1Q63870 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.92■□□□□ 0.62
Col7a1Q63870 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col7a1Q63870 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col7a1Q63870 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col7a1Q63870 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Col7a1Q63870 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms