Protein–RNA interactions for Protein: Q62471

Lcn3, Vomeronasal secretory protein 1, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn3Q62471 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lcn3Q62471 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Lcn3Q62471 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lcn3Q62471 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Lcn3Q62471 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lcn3Q62471 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lcn3Q62471 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.87■□□□□ 0.61
Lcn3Q62471 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lcn3Q62471 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Lcn3Q62471 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lcn3Q62471 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lcn3Q62471 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lcn3Q62471 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lcn3Q62471 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lcn3Q62471 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lcn3Q62471 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lcn3Q62471 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lcn3Q62471 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lcn3Q62471 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.85■□□□□ 0.61
Lcn3Q62471 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Lcn3Q62471 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.85■□□□□ 0.61
Lcn3Q62471 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.85■□□□□ 0.61
Lcn3Q62471 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lcn3Q62471 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lcn3Q62471 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Lcn3Q62471 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lcn3Q62471 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lcn3Q62471 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lcn3Q62471 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lcn3Q62471 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lcn3Q62471 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lcn3Q62471 Zfp131-205ENSMUST00000223812 663 ntBASIC18.84■□□□□ 0.61
Lcn3Q62471 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lcn3Q62471 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lcn3Q62471 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lcn3Q62471 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lcn3Q62471 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lcn3Q62471 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lcn3Q62471 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.83■□□□□ 0.61
Lcn3Q62471 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.83■□□□□ 0.6
Lcn3Q62471 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lcn3Q62471 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Lcn3Q62471 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lcn3Q62471 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lcn3Q62471 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Lcn3Q62471 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lcn3Q62471 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.81■□□□□ 0.6
Lcn3Q62471 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lcn3Q62471 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lcn3Q62471 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.81■□□□□ 0.6
Lcn3Q62471 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lcn3Q62471 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lcn3Q62471 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lcn3Q62471 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lcn3Q62471 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lcn3Q62471 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.8■□□□□ 0.6
Lcn3Q62471 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lcn3Q62471 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lcn3Q62471 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lcn3Q62471 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lcn3Q62471 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.79■□□□□ 0.6
Lcn3Q62471 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lcn3Q62471 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lcn3Q62471 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lcn3Q62471 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lcn3Q62471 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lcn3Q62471 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lcn3Q62471 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lcn3Q62471 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lcn3Q62471 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lcn3Q62471 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lcn3Q62471 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lcn3Q62471 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.77■□□□□ 0.6
Lcn3Q62471 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.77■□□□□ 0.59
Lcn3Q62471 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.77■□□□□ 0.59
Lcn3Q62471 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Lcn3Q62471 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lcn3Q62471 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.76■□□□□ 0.59
Lcn3Q62471 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lcn3Q62471 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.76■□□□□ 0.59
Lcn3Q62471 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.76■□□□□ 0.59
Lcn3Q62471 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Lcn3Q62471 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lcn3Q62471 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lcn3Q62471 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lcn3Q62471 Gm24970-201ENSMUST00000175582 82 ntBASIC18.75■□□□□ 0.59
Lcn3Q62471 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lcn3Q62471 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lcn3Q62471 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lcn3Q62471 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lcn3Q62471 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lcn3Q62471 Gm9397-201ENSMUST00000200125 605 ntBASIC18.74■□□□□ 0.59
Lcn3Q62471 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lcn3Q62471 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Lcn3Q62471 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.73■□□□□ 0.59
Lcn3Q62471 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lcn3Q62471 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.73■□□□□ 0.59
Lcn3Q62471 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Lcn3Q62471 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lcn3Q62471 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms