Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Col11a1Q61245 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col11a1Q61245 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC25.49■■□□□ 1.67
Col11a1Q61245 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Col11a1Q61245 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.49■■□□□ 1.67
Col11a1Q61245 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Col11a1Q61245 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col11a1Q61245 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Col11a1Q61245 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.48■■□□□ 1.67
Col11a1Q61245 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Col11a1Q61245 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.47■■□□□ 1.67
Col11a1Q61245 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Col11a1Q61245 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.47■■□□□ 1.67
Col11a1Q61245 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Col11a1Q61245 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Col11a1Q61245 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col11a1Q61245 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC25.46■■□□□ 1.67
Col11a1Q61245 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Col11a1Q61245 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Col11a1Q61245 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col11a1Q61245 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col11a1Q61245 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col11a1Q61245 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col11a1Q61245 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Col11a1Q61245 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Col11a1Q61245 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Col11a1Q61245 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.45■■□□□ 1.66
Col11a1Q61245 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.44■■□□□ 1.66
Col11a1Q61245 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Col11a1Q61245 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Col11a1Q61245 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Col11a1Q61245 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col11a1Q61245 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Col11a1Q61245 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
Col11a1Q61245 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC25.43■■□□□ 1.66
Col11a1Q61245 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.43■■□□□ 1.66
Col11a1Q61245 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Col11a1Q61245 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC25.43■■□□□ 1.66
Col11a1Q61245 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC25.42■■□□□ 1.66
Col11a1Q61245 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC25.42■■□□□ 1.66
Col11a1Q61245 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC25.42■■□□□ 1.66
Col11a1Q61245 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Col11a1Q61245 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Col11a1Q61245 Gm12922-201ENSMUST00000120626 809 ntBASIC25.41■■□□□ 1.66
Col11a1Q61245 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Col11a1Q61245 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Col11a1Q61245 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Col11a1Q61245 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Col11a1Q61245 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
Col11a1Q61245 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Col11a1Q61245 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC25.4■■□□□ 1.66
Col11a1Q61245 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Col11a1Q61245 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Col11a1Q61245 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Col11a1Q61245 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col11a1Q61245 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col11a1Q61245 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Col11a1Q61245 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.38■■□□□ 1.65
Col11a1Q61245 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col11a1Q61245 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC25.37■■□□□ 1.65
Col11a1Q61245 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC25.37■■□□□ 1.65
Col11a1Q61245 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC25.37■■□□□ 1.65
Col11a1Q61245 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col11a1Q61245 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Col11a1Q61245 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Col11a1Q61245 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col11a1Q61245 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col11a1Q61245 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC25.36■■□□□ 1.65
Col11a1Q61245 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Col11a1Q61245 Appbp2os-202ENSMUST00000206972 447 ntBASIC25.35■■□□□ 1.65
Col11a1Q61245 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Col11a1Q61245 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Col11a1Q61245 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Col11a1Q61245 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Col11a1Q61245 Gm27454-201ENSMUST00000185090 204 ntBASIC25.35■■□□□ 1.65
Col11a1Q61245 Gm40881-201ENSMUST00000223397 166 ntBASIC25.35■■□□□ 1.65
Col11a1Q61245 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Col11a1Q61245 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Col11a1Q61245 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Col11a1Q61245 Gm5297-201ENSMUST00000198555 1171 ntBASIC25.33■■□□□ 1.65
Col11a1Q61245 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Col11a1Q61245 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC25.33■■□□□ 1.64
Col11a1Q61245 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Col11a1Q61245 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.32■■□□□ 1.64
Col11a1Q61245 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Col11a1Q61245 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Col11a1Q61245 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Col11a1Q61245 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC25.3■■□□□ 1.64
Col11a1Q61245 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col11a1Q61245 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col11a1Q61245 Gm45417-201ENSMUST00000209533 758 ntBASIC25.3■■□□□ 1.64
Col11a1Q61245 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC25.3■■□□□ 1.64
Col11a1Q61245 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Col11a1Q61245 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Col11a1Q61245 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Col11a1Q61245 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Col11a1Q61245 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Col11a1Q61245 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Col11a1Q61245 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC25.28■■□□□ 1.64
Col11a1Q61245 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC25.27■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms