Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.2■■□□□ 1.14
Sdf4Q61112 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sdf4Q61112 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Sdf4Q61112 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.2■■□□□ 1.14
Sdf4Q61112 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Sdf4Q61112 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 Gm7332-201ENSMUST00000118351 454 ntBASIC22.19■■□□□ 1.14
Sdf4Q61112 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Sdf4Q61112 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.19■■□□□ 1.14
Sdf4Q61112 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sdf4Q61112 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Sdf4Q61112 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sdf4Q61112 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Sdf4Q61112 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.18■■□□□ 1.14
Sdf4Q61112 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.17■■□□□ 1.14
Sdf4Q61112 Gm12366-201ENSMUST00000121722 873 ntBASIC22.17■■□□□ 1.14
Sdf4Q61112 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.17■■□□□ 1.14
Sdf4Q61112 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.17■■□□□ 1.14
Sdf4Q61112 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.17■■□□□ 1.14
Sdf4Q61112 Gm5786-201ENSMUST00000085368 882 ntBASIC22.17■■□□□ 1.14
Sdf4Q61112 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Sdf4Q61112 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sdf4Q61112 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Sdf4Q61112 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.16■■□□□ 1.14
Sdf4Q61112 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.16■■□□□ 1.14
Sdf4Q61112 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.16■■□□□ 1.14
Sdf4Q61112 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Sdf4Q61112 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sdf4Q61112 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Sdf4Q61112 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sdf4Q61112 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sdf4Q61112 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Sdf4Q61112 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.15■■□□□ 1.14
Sdf4Q61112 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Sdf4Q61112 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.15■■□□□ 1.14
Sdf4Q61112 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Sdf4Q61112 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Sdf4Q61112 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Sdf4Q61112 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Sdf4Q61112 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Sdf4Q61112 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Sdf4Q61112 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.14■■□□□ 1.13
Sdf4Q61112 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Sdf4Q61112 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Sdf4Q61112 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Sdf4Q61112 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sdf4Q61112 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Sdf4Q61112 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sdf4Q61112 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.13■■□□□ 1.13
Sdf4Q61112 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Sdf4Q61112 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sdf4Q61112 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sdf4Q61112 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.12■■□□□ 1.13
Sdf4Q61112 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Sdf4Q61112 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Sdf4Q61112 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Sdf4Q61112 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Gm22567-201ENSMUST00000175542 342 ntBASIC22.11■■□□□ 1.13
Sdf4Q61112 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Sdf4Q61112 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Sdf4Q61112 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Sdf4Q61112 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Sdf4Q61112 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Sdf4Q61112 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sdf4Q61112 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sdf4Q61112 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.09■■□□□ 1.13
Sdf4Q61112 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sdf4Q61112 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sdf4Q61112 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Sdf4Q61112 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC22.08■■□□□ 1.13
Sdf4Q61112 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Sdf4Q61112 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.08■■□□□ 1.13
Sdf4Q61112 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sdf4Q61112 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sdf4Q61112 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sdf4Q61112 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sdf4Q61112 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Sdf4Q61112 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sdf4Q61112 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sdf4Q61112 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.06■■□□□ 1.12
Sdf4Q61112 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sdf4Q61112 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sdf4Q61112 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sdf4Q61112 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms