Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.4■□□□□ 0.54
Scarb1Q61009 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Scarb1Q61009 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Scarb1Q61009 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scarb1Q61009 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scarb1Q61009 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scarb1Q61009 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scarb1Q61009 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scarb1Q61009 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scarb1Q61009 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scarb1Q61009 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.39■□□□□ 0.53
Scarb1Q61009 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scarb1Q61009 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Scarb1Q61009 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Scarb1Q61009 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Scarb1Q61009 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scarb1Q61009 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.37■□□□□ 0.53
Scarb1Q61009 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scarb1Q61009 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scarb1Q61009 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scarb1Q61009 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Scarb1Q61009 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scarb1Q61009 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scarb1Q61009 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scarb1Q61009 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scarb1Q61009 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scarb1Q61009 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scarb1Q61009 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scarb1Q61009 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scarb1Q61009 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scarb1Q61009 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Scarb1Q61009 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scarb1Q61009 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scarb1Q61009 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scarb1Q61009 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scarb1Q61009 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scarb1Q61009 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scarb1Q61009 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scarb1Q61009 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scarb1Q61009 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scarb1Q61009 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scarb1Q61009 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scarb1Q61009 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scarb1Q61009 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scarb1Q61009 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Scarb1Q61009 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scarb1Q61009 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scarb1Q61009 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scarb1Q61009 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Scarb1Q61009 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scarb1Q61009 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scarb1Q61009 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scarb1Q61009 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scarb1Q61009 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scarb1Q61009 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scarb1Q61009 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scarb1Q61009 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.32■□□□□ 0.52
Scarb1Q61009 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Scarb1Q61009 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.32■□□□□ 0.52
Scarb1Q61009 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scarb1Q61009 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scarb1Q61009 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scarb1Q61009 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scarb1Q61009 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scarb1Q61009 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.31■□□□□ 0.52
Scarb1Q61009 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Scarb1Q61009 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scarb1Q61009 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scarb1Q61009 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.31■□□□□ 0.52
Scarb1Q61009 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scarb1Q61009 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scarb1Q61009 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scarb1Q61009 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Scarb1Q61009 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scarb1Q61009 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.3■□□□□ 0.52
Scarb1Q61009 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scarb1Q61009 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scarb1Q61009 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scarb1Q61009 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.3■□□□□ 0.52
Scarb1Q61009 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scarb1Q61009 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scarb1Q61009 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scarb1Q61009 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scarb1Q61009 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scarb1Q61009 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scarb1Q61009 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scarb1Q61009 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scarb1Q61009 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Scarb1Q61009 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scarb1Q61009 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scarb1Q61009 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Scarb1Q61009 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Scarb1Q61009 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.27■□□□□ 0.52
Scarb1Q61009 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.27■□□□□ 0.52
Scarb1Q61009 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scarb1Q61009 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scarb1Q61009 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Scarb1Q61009 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Scarb1Q61009 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Scarb1Q61009 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms