Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.32■■□□□ 1.32
CDCP2Q5VXM1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.32■■□□□ 1.32
CDCP2Q5VXM1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.32■■□□□ 1.32
CDCP2Q5VXM1 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.32■■□□□ 1.32
CDCP2Q5VXM1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDCP2Q5VXM1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CDCP2Q5VXM1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDCP2Q5VXM1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.31■■□□□ 1.32
CDCP2Q5VXM1 AC022616.5-201ENST00000518796 181 ntBASIC23.31■■□□□ 1.32
CDCP2Q5VXM1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
CDCP2Q5VXM1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CDCP2Q5VXM1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDCP2Q5VXM1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDCP2Q5VXM1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CDCP2Q5VXM1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDCP2Q5VXM1 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.3■■□□□ 1.32
CDCP2Q5VXM1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDCP2Q5VXM1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.3■■□□□ 1.32
CDCP2Q5VXM1 KRT18P10-201ENST00000388836 1287 ntBASIC23.29■■□□□ 1.32
CDCP2Q5VXM1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDCP2Q5VXM1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDCP2Q5VXM1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
CDCP2Q5VXM1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDCP2Q5VXM1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.29■■□□□ 1.32
CDCP2Q5VXM1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CDCP2Q5VXM1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
CDCP2Q5VXM1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.28■■□□□ 1.32
CDCP2Q5VXM1 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDCP2Q5VXM1 KRT125P-201ENST00000546827 989 ntBASIC23.28■■□□□ 1.32
CDCP2Q5VXM1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDCP2Q5VXM1 AC008406.3-201ENST00000620001 1374 ntBASIC23.27■■□□□ 1.32
CDCP2Q5VXM1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDCP2Q5VXM1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDCP2Q5VXM1 MIR4787-201ENST00000607364 84 ntBASIC23.27■■□□□ 1.32
CDCP2Q5VXM1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
CDCP2Q5VXM1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDCP2Q5VXM1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CDCP2Q5VXM1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CDCP2Q5VXM1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.26■■□□□ 1.31
CDCP2Q5VXM1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.26■■□□□ 1.31
CDCP2Q5VXM1 BX664725.1-201ENST00000438252 379 ntBASIC23.26■■□□□ 1.31
CDCP2Q5VXM1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.26■■□□□ 1.31
CDCP2Q5VXM1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDCP2Q5VXM1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CDCP2Q5VXM1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CDCP2Q5VXM1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.25■■□□□ 1.31
CDCP2Q5VXM1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.24■■□□□ 1.31
CDCP2Q5VXM1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDCP2Q5VXM1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDCP2Q5VXM1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
CDCP2Q5VXM1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.24■■□□□ 1.31
CDCP2Q5VXM1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.24■■□□□ 1.31
CDCP2Q5VXM1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDCP2Q5VXM1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CDCP2Q5VXM1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CDCP2Q5VXM1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDCP2Q5VXM1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
CDCP2Q5VXM1 KRT18P24-201ENST00000344739 1156 ntBASIC23.23■■□□□ 1.31
CDCP2Q5VXM1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CDCP2Q5VXM1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDCP2Q5VXM1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.22■■□□□ 1.31
CDCP2Q5VXM1 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDCP2Q5VXM1 UNC93B8-201ENST00000511903 705 ntBASIC23.22■■□□□ 1.31
CDCP2Q5VXM1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
CDCP2Q5VXM1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CDCP2Q5VXM1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CDCP2Q5VXM1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.21■■□□□ 1.31
CDCP2Q5VXM1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
CDCP2Q5VXM1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.21■■□□□ 1.31
CDCP2Q5VXM1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.21■■□□□ 1.31
CDCP2Q5VXM1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CDCP2Q5VXM1 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.2■■□□□ 1.3
CDCP2Q5VXM1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDCP2Q5VXM1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CDCP2Q5VXM1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.2■■□□□ 1.3
CDCP2Q5VXM1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.2■■□□□ 1.3
CDCP2Q5VXM1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CDCP2Q5VXM1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDCP2Q5VXM1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.19■■□□□ 1.3
CDCP2Q5VXM1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
CDCP2Q5VXM1 ABCB10P1-201ENST00000614297 2181 ntBASIC23.18■■□□□ 1.3
CDCP2Q5VXM1 AC137630.3-201ENST00000607245 391 ntBASIC23.18■■□□□ 1.3
CDCP2Q5VXM1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDCP2Q5VXM1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDCP2Q5VXM1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDCP2Q5VXM1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.17■■□□□ 1.3
CDCP2Q5VXM1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.17■■□□□ 1.3
CDCP2Q5VXM1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDCP2Q5VXM1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDCP2Q5VXM1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDCP2Q5VXM1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDCP2Q5VXM1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDCP2Q5VXM1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDCP2Q5VXM1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDCP2Q5VXM1 KRT16P3-201ENST00000439127 1283 ntBASIC23.16■■□□□ 1.3
CDCP2Q5VXM1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.16■■□□□ 1.3
CDCP2Q5VXM1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CDCP2Q5VXM1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDCP2Q5VXM1 AL449106.1-201ENST00000608517 1980 ntBASIC23.16■■□□□ 1.3
CDCP2Q5VXM1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms