Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
LRRK2Q5S007 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRK2Q5S007 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LRRK2Q5S007 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRK2Q5S007 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.58■■□□□ 1.04
LRRK2Q5S007 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRK2Q5S007 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.58■■□□□ 1.04
LRRK2Q5S007 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
LRRK2Q5S007 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.58■■□□□ 1.04
LRRK2Q5S007 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.04
LRRK2Q5S007 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.57■■□□□ 1.04
LRRK2Q5S007 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRK2Q5S007 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.57■■□□□ 1.04
LRRK2Q5S007 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRRK2Q5S007 AC106739.1-201ENST00000617035 715 ntBASIC21.57■■□□□ 1.04
LRRK2Q5S007 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
LRRK2Q5S007 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
LRRK2Q5S007 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRK2Q5S007 AC087623.3-201ENST00000607047 1098 ntBASIC21.56■■□□□ 1.04
LRRK2Q5S007 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRK2Q5S007 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRK2Q5S007 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRK2Q5S007 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRK2Q5S007 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRK2Q5S007 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
LRRK2Q5S007 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRK2Q5S007 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRK2Q5S007 AC100797.4-201ENST00000631653 1827 ntBASIC21.54■■□□□ 1.04
LRRK2Q5S007 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRK2Q5S007 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
LRRK2Q5S007 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRK2Q5S007 AL512631.2-201ENST00000604634 923 ntBASIC21.54■■□□□ 1.04
LRRK2Q5S007 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.53■■□□□ 1.04
LRRK2Q5S007 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
LRRK2Q5S007 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRK2Q5S007 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRK2Q5S007 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRRK2Q5S007 AC142381.2-201ENST00000566120 298 ntBASIC21.52■■□□□ 1.04
LRRK2Q5S007 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRK2Q5S007 AL162430.1-201ENST00000480705 870 ntBASIC21.52■■□□□ 1.03
LRRK2Q5S007 AL031432.3-201ENST00000607698 485 ntBASIC21.52■■□□□ 1.03
LRRK2Q5S007 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
LRRK2Q5S007 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.52■■□□□ 1.03
LRRK2Q5S007 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
LRRK2Q5S007 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRK2Q5S007 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.51■■□□□ 1.03
LRRK2Q5S007 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRRK2Q5S007 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK2Q5S007 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK2Q5S007 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.5■■□□□ 1.03
LRRK2Q5S007 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRRK2Q5S007 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.5■■□□□ 1.03
LRRK2Q5S007 AL356740.2-201ENST00000601559 647 ntBASIC21.5■■□□□ 1.03
LRRK2Q5S007 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
LRRK2Q5S007 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRK2Q5S007 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.49■■□□□ 1.03
LRRK2Q5S007 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.49■■□□□ 1.03
LRRK2Q5S007 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.48■■□□□ 1.03
LRRK2Q5S007 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
LRRK2Q5S007 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LRRK2Q5S007 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRK2Q5S007 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LRRK2Q5S007 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRRK2Q5S007 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
LRRK2Q5S007 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
LRRK2Q5S007 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.46■■□□□ 1.03
LRRK2Q5S007 MIR6821-201ENST00000617625 74 ntBASIC21.46■■□□□ 1.03
LRRK2Q5S007 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRRK2Q5S007 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
LRRK2Q5S007 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.45■■□□□ 1.02
LRRK2Q5S007 MIR4281-201ENST00000580852 62 ntBASIC21.45■■□□□ 1.02
LRRK2Q5S007 MIR6724-1-201ENST00000616420 92 ntBASIC21.45■■□□□ 1.02
LRRK2Q5S007 MIR6724-2-201ENST00000616483 92 ntBASIC21.45■■□□□ 1.02
LRRK2Q5S007 MIR6724-4-201ENST00000617390 92 ntBASIC21.45■■□□□ 1.02
LRRK2Q5S007 MIR6724-3-201ENST00000622482 92 ntBASIC21.45■■□□□ 1.02
LRRK2Q5S007 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.44■■□□□ 1.02
LRRK2Q5S007 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.44■■□□□ 1.02
LRRK2Q5S007 AP004833.2-201ENST00000532228 1454 ntBASIC21.44■■□□□ 1.02
LRRK2Q5S007 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LRRK2Q5S007 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRRK2Q5S007 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
LRRK2Q5S007 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
LRRK2Q5S007 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
LRRK2Q5S007 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.43■■□□□ 1.02
LRRK2Q5S007 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.43■■□□□ 1.02
LRRK2Q5S007 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRK2Q5S007 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRK2Q5S007 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRRK2Q5S007 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.43■■□□□ 1.02
LRRK2Q5S007 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.43■■□□□ 1.02
LRRK2Q5S007 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
LRRK2Q5S007 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRK2Q5S007 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRK2Q5S007 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.42■■□□□ 1.02
LRRK2Q5S007 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRRK2Q5S007 AC010997.5-201ENST00000609182 354 ntBASIC21.42■■□□□ 1.02
LRRK2Q5S007 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
LRRK2Q5S007 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
LRRK2Q5S007 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRRK2Q5S007 AC090192.1-201ENST00000517740 490 ntBASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms