Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clhc1Q5M6W3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clhc1Q5M6W3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.06■□□□□ 0.96
Clhc1Q5M6W3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clhc1Q5M6W3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clhc1Q5M6W3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clhc1Q5M6W3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Clhc1Q5M6W3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clhc1Q5M6W3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.05■□□□□ 0.96
Clhc1Q5M6W3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
Clhc1Q5M6W3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.05■□□□□ 0.96
Clhc1Q5M6W3 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.05■□□□□ 0.96
Clhc1Q5M6W3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clhc1Q5M6W3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clhc1Q5M6W3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.04■□□□□ 0.96
Clhc1Q5M6W3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.04■□□□□ 0.96
Clhc1Q5M6W3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clhc1Q5M6W3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clhc1Q5M6W3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clhc1Q5M6W3 Gm7432-201ENSMUST00000210343 879 ntBASIC21.03■□□□□ 0.96
Clhc1Q5M6W3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clhc1Q5M6W3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clhc1Q5M6W3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Clhc1Q5M6W3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clhc1Q5M6W3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clhc1Q5M6W3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clhc1Q5M6W3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Clhc1Q5M6W3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Clhc1Q5M6W3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clhc1Q5M6W3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clhc1Q5M6W3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Clhc1Q5M6W3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Clhc1Q5M6W3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clhc1Q5M6W3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Clhc1Q5M6W3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Clhc1Q5M6W3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clhc1Q5M6W3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clhc1Q5M6W3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clhc1Q5M6W3 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.99■□□□□ 0.95
Clhc1Q5M6W3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Clhc1Q5M6W3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Clhc1Q5M6W3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clhc1Q5M6W3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Clhc1Q5M6W3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clhc1Q5M6W3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clhc1Q5M6W3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clhc1Q5M6W3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clhc1Q5M6W3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Clhc1Q5M6W3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Clhc1Q5M6W3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Clhc1Q5M6W3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clhc1Q5M6W3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Clhc1Q5M6W3 Gm37136-201ENSMUST00000194368 194 ntBASIC20.97■□□□□ 0.95
Clhc1Q5M6W3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clhc1Q5M6W3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clhc1Q5M6W3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clhc1Q5M6W3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clhc1Q5M6W3 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.96■□□□□ 0.95
Clhc1Q5M6W3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clhc1Q5M6W3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clhc1Q5M6W3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clhc1Q5M6W3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.96■□□□□ 0.95
Clhc1Q5M6W3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clhc1Q5M6W3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Clhc1Q5M6W3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clhc1Q5M6W3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Clhc1Q5M6W3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Clhc1Q5M6W3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Clhc1Q5M6W3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clhc1Q5M6W3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clhc1Q5M6W3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clhc1Q5M6W3 Gm11599-201ENSMUST00000118720 878 ntBASIC20.93■□□□□ 0.94
Clhc1Q5M6W3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clhc1Q5M6W3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clhc1Q5M6W3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.92■□□□□ 0.94
Clhc1Q5M6W3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clhc1Q5M6W3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clhc1Q5M6W3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clhc1Q5M6W3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Clhc1Q5M6W3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Clhc1Q5M6W3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Clhc1Q5M6W3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clhc1Q5M6W3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Clhc1Q5M6W3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clhc1Q5M6W3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clhc1Q5M6W3 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.9■□□□□ 0.94
Clhc1Q5M6W3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clhc1Q5M6W3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clhc1Q5M6W3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Clhc1Q5M6W3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.9■□□□□ 0.94
Clhc1Q5M6W3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clhc1Q5M6W3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clhc1Q5M6W3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clhc1Q5M6W3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clhc1Q5M6W3 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clhc1Q5M6W3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clhc1Q5M6W3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clhc1Q5M6W3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clhc1Q5M6W3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Clhc1Q5M6W3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms