Protein–RNA interactions for Protein: Q3V0X1

Smim9, Small integral membrane protein 9, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim9Q3V0X1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smim9Q3V0X1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Smim9Q3V0X1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smim9Q3V0X1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim9Q3V0X1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim9Q3V0X1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim9Q3V0X1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smim9Q3V0X1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim9Q3V0X1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim9Q3V0X1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim9Q3V0X1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim9Q3V0X1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Smim9Q3V0X1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Smim9Q3V0X1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smim9Q3V0X1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Smim9Q3V0X1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.89■□□□□ 0.29
Smim9Q3V0X1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smim9Q3V0X1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smim9Q3V0X1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smim9Q3V0X1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smim9Q3V0X1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smim9Q3V0X1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Smim9Q3V0X1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.88■□□□□ 0.29
Smim9Q3V0X1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.88■□□□□ 0.29
Smim9Q3V0X1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smim9Q3V0X1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smim9Q3V0X1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smim9Q3V0X1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smim9Q3V0X1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Smim9Q3V0X1 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.87■□□□□ 0.29
Smim9Q3V0X1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smim9Q3V0X1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smim9Q3V0X1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smim9Q3V0X1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Smim9Q3V0X1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smim9Q3V0X1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Smim9Q3V0X1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Smim9Q3V0X1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smim9Q3V0X1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smim9Q3V0X1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smim9Q3V0X1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smim9Q3V0X1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smim9Q3V0X1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smim9Q3V0X1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smim9Q3V0X1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Smim9Q3V0X1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim9Q3V0X1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim9Q3V0X1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smim9Q3V0X1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Smim9Q3V0X1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Smim9Q3V0X1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim9Q3V0X1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smim9Q3V0X1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.83■□□□□ 0.28
Smim9Q3V0X1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.83■□□□□ 0.28
Smim9Q3V0X1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smim9Q3V0X1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smim9Q3V0X1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smim9Q3V0X1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim9Q3V0X1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim9Q3V0X1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Smim9Q3V0X1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.82■□□□□ 0.28
Smim9Q3V0X1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim9Q3V0X1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smim9Q3V0X1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smim9Q3V0X1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Smim9Q3V0X1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Smim9Q3V0X1 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.81■□□□□ 0.28
Smim9Q3V0X1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.81■□□□□ 0.28
Smim9Q3V0X1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Smim9Q3V0X1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smim9Q3V0X1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim9Q3V0X1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smim9Q3V0X1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim9Q3V0X1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim9Q3V0X1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim9Q3V0X1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim9Q3V0X1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim9Q3V0X1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Smim9Q3V0X1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC16.8■□□□□ 0.28
Smim9Q3V0X1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Smim9Q3V0X1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Smim9Q3V0X1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
Smim9Q3V0X1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim9Q3V0X1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim9Q3V0X1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim9Q3V0X1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim9Q3V0X1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.79■□□□□ 0.28
Smim9Q3V0X1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim9Q3V0X1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim9Q3V0X1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim9Q3V0X1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim9Q3V0X1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim9Q3V0X1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim9Q3V0X1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smim9Q3V0X1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smim9Q3V0X1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smim9Q3V0X1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim9Q3V0X1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smim9Q3V0X1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smim9Q3V0X1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms