Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Fam196aQ3USH1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.49■■□□□ 1.19
Fam196aQ3USH1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Fam196aQ3USH1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Fam196aQ3USH1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Fam196aQ3USH1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Fam196aQ3USH1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.49■■□□□ 1.19
Fam196aQ3USH1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.49■■□□□ 1.19
Fam196aQ3USH1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Fam196aQ3USH1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Fam196aQ3USH1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
Fam196aQ3USH1 Gm8495-201ENSMUST00000188740 694 ntBASIC22.48■■□□□ 1.19
Fam196aQ3USH1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.48■■□□□ 1.19
Fam196aQ3USH1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Fam196aQ3USH1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Fam196aQ3USH1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Fam196aQ3USH1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Fam196aQ3USH1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.47■■□□□ 1.19
Fam196aQ3USH1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.47■■□□□ 1.19
Fam196aQ3USH1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
Fam196aQ3USH1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Fam196aQ3USH1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Fam196aQ3USH1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Fam196aQ3USH1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.46■■□□□ 1.19
Fam196aQ3USH1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Fam196aQ3USH1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.46■■□□□ 1.19
Fam196aQ3USH1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.46■■□□□ 1.19
Fam196aQ3USH1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Fam196aQ3USH1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.45■■□□□ 1.18
Fam196aQ3USH1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.45■■□□□ 1.18
Fam196aQ3USH1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Fam196aQ3USH1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Fam196aQ3USH1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Fam196aQ3USH1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Fam196aQ3USH1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Fam196aQ3USH1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Fam196aQ3USH1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Fam196aQ3USH1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Fam196aQ3USH1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Fam196aQ3USH1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Fam196aQ3USH1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Fam196aQ3USH1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Fam196aQ3USH1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Fam196aQ3USH1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.4■■□□□ 1.18
Fam196aQ3USH1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Fam196aQ3USH1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Fam196aQ3USH1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Fam196aQ3USH1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Fam196aQ3USH1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Fam196aQ3USH1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Fam196aQ3USH1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.38■■□□□ 1.17
Fam196aQ3USH1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Fam196aQ3USH1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Fam196aQ3USH1 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.38■■□□□ 1.17
Fam196aQ3USH1 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Fam196aQ3USH1 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Fam196aQ3USH1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Fam196aQ3USH1 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Fam196aQ3USH1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Fam196aQ3USH1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Fam196aQ3USH1 Gm18284-201ENSMUST00000172604 624 ntBASIC22.37■■□□□ 1.17
Fam196aQ3USH1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Fam196aQ3USH1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Fam196aQ3USH1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Fam196aQ3USH1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Fam196aQ3USH1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Fam196aQ3USH1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Fam196aQ3USH1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Fam196aQ3USH1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.35■■□□□ 1.17
Fam196aQ3USH1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Fam196aQ3USH1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Fam196aQ3USH1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Fam196aQ3USH1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Fam196aQ3USH1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Fam196aQ3USH1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.34■■□□□ 1.17
Fam196aQ3USH1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.34■■□□□ 1.17
Fam196aQ3USH1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Fam196aQ3USH1 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.34■■□□□ 1.17
Fam196aQ3USH1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Fam196aQ3USH1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.33■■□□□ 1.17
Fam196aQ3USH1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Fam196aQ3USH1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Fam196aQ3USH1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Fam196aQ3USH1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Fam196aQ3USH1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Fam196aQ3USH1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.32■■□□□ 1.16
Fam196aQ3USH1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Fam196aQ3USH1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Fam196aQ3USH1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.31■■□□□ 1.16
Fam196aQ3USH1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Fam196aQ3USH1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Fam196aQ3USH1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
Fam196aQ3USH1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.3■■□□□ 1.16
Fam196aQ3USH1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Fam196aQ3USH1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.3■■□□□ 1.16
Fam196aQ3USH1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Fam196aQ3USH1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.29■■□□□ 1.16
Fam196aQ3USH1 Gm29257-201ENSMUST00000186115 639 ntBASIC22.29■■□□□ 1.16
Fam196aQ3USH1 Golgb1-201ENSMUST00000023534 498 ntBASIC22.29■■□□□ 1.16
Fam196aQ3USH1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms