Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx6-3Q3UHX8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx6-3Q3UHX8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nkx6-3Q3UHX8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nkx6-3Q3UHX8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.9■□□□□ 0.94
Nkx6-3Q3UHX8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.9■□□□□ 0.94
Nkx6-3Q3UHX8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nkx6-3Q3UHX8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx6-3Q3UHX8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx6-3Q3UHX8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx6-3Q3UHX8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx6-3Q3UHX8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx6-3Q3UHX8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx6-3Q3UHX8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx6-3Q3UHX8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
Nkx6-3Q3UHX8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx6-3Q3UHX8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nkx6-3Q3UHX8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx6-3Q3UHX8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Nkx6-3Q3UHX8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx6-3Q3UHX8 Gm5921-201ENSMUST00000075898 882 ntBASIC20.88■□□□□ 0.93
Nkx6-3Q3UHX8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nkx6-3Q3UHX8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.87■□□□□ 0.93
Nkx6-3Q3UHX8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx6-3Q3UHX8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.87■□□□□ 0.93
Nkx6-3Q3UHX8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nkx6-3Q3UHX8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Nkx6-3Q3UHX8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.86■□□□□ 0.93
Nkx6-3Q3UHX8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx6-3Q3UHX8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx6-3Q3UHX8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx6-3Q3UHX8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nkx6-3Q3UHX8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.85■□□□□ 0.93
Nkx6-3Q3UHX8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx6-3Q3UHX8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nkx6-3Q3UHX8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.84■□□□□ 0.93
Nkx6-3Q3UHX8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx6-3Q3UHX8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nkx6-3Q3UHX8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.83■□□□□ 0.93
Nkx6-3Q3UHX8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx6-3Q3UHX8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx6-3Q3UHX8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx6-3Q3UHX8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx6-3Q3UHX8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.82■□□□□ 0.92
Nkx6-3Q3UHX8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.82■□□□□ 0.92
Nkx6-3Q3UHX8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx6-3Q3UHX8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx6-3Q3UHX8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx6-3Q3UHX8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx6-3Q3UHX8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx6-3Q3UHX8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx6-3Q3UHX8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx6-3Q3UHX8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Nkx6-3Q3UHX8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx6-3Q3UHX8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx6-3Q3UHX8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nkx6-3Q3UHX8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nkx6-3Q3UHX8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx6-3Q3UHX8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx6-3Q3UHX8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx6-3Q3UHX8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Nkx6-3Q3UHX8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.78■□□□□ 0.92
Nkx6-3Q3UHX8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx6-3Q3UHX8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx6-3Q3UHX8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.78■□□□□ 0.92
Nkx6-3Q3UHX8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.78■□□□□ 0.92
Nkx6-3Q3UHX8 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.78■□□□□ 0.92
Nkx6-3Q3UHX8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Nkx6-3Q3UHX8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx6-3Q3UHX8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.77■□□□□ 0.91
Nkx6-3Q3UHX8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx6-3Q3UHX8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nkx6-3Q3UHX8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx6-3Q3UHX8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx6-3Q3UHX8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Nkx6-3Q3UHX8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.75■□□□□ 0.91
Nkx6-3Q3UHX8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.75■□□□□ 0.91
Nkx6-3Q3UHX8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.75■□□□□ 0.91
Nkx6-3Q3UHX8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx6-3Q3UHX8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nkx6-3Q3UHX8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Nkx6-3Q3UHX8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx6-3Q3UHX8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx6-3Q3UHX8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx6-3Q3UHX8 Gm13238-201ENSMUST00000117655 780 ntBASIC20.74■□□□□ 0.91
Nkx6-3Q3UHX8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx6-3Q3UHX8 Gm45444-201ENSMUST00000211394 898 ntBASIC20.74■□□□□ 0.91
Nkx6-3Q3UHX8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx6-3Q3UHX8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx6-3Q3UHX8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx6-3Q3UHX8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Nkx6-3Q3UHX8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx6-3Q3UHX8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Nkx6-3Q3UHX8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx6-3Q3UHX8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx6-3Q3UHX8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx6-3Q3UHX8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx6-3Q3UHX8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.72■□□□□ 0.91
Nkx6-3Q3UHX8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Nkx6-3Q3UHX8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms