Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.69■□□□□ 0.9
Tnrc6aQ3UHK8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnrc6aQ3UHK8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnrc6aQ3UHK8 Gm10232-201ENSMUST00000089221 720 ntBASIC20.67■□□□□ 0.9
Tnrc6aQ3UHK8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnrc6aQ3UHK8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnrc6aQ3UHK8 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnrc6aQ3UHK8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.66■□□□□ 0.9
Tnrc6aQ3UHK8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.66■□□□□ 0.9
Tnrc6aQ3UHK8 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.66■□□□□ 0.9
Tnrc6aQ3UHK8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnrc6aQ3UHK8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnrc6aQ3UHK8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnrc6aQ3UHK8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc6aQ3UHK8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6aQ3UHK8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6aQ3UHK8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc6aQ3UHK8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tnrc6aQ3UHK8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tnrc6aQ3UHK8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.63■□□□□ 0.89
Tnrc6aQ3UHK8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6aQ3UHK8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6aQ3UHK8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc6aQ3UHK8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Tnrc6aQ3UHK8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.61■□□□□ 0.89
Tnrc6aQ3UHK8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.61■□□□□ 0.89
Tnrc6aQ3UHK8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tnrc6aQ3UHK8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tnrc6aQ3UHK8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tnrc6aQ3UHK8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Tnrc6aQ3UHK8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tnrc6aQ3UHK8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnrc6aQ3UHK8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tnrc6aQ3UHK8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.58■□□□□ 0.88
Tnrc6aQ3UHK8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Tnrc6aQ3UHK8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tnrc6aQ3UHK8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.56■□□□□ 0.88
Tnrc6aQ3UHK8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tnrc6aQ3UHK8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tnrc6aQ3UHK8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tnrc6aQ3UHK8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.54■□□□□ 0.88
Tnrc6aQ3UHK8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnrc6aQ3UHK8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tnrc6aQ3UHK8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnrc6aQ3UHK8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnrc6aQ3UHK8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.52■□□□□ 0.88
Tnrc6aQ3UHK8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnrc6aQ3UHK8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tnrc6aQ3UHK8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tnrc6aQ3UHK8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.52■□□□□ 0.87
Tnrc6aQ3UHK8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnrc6aQ3UHK8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnrc6aQ3UHK8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.51■□□□□ 0.87
Tnrc6aQ3UHK8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnrc6aQ3UHK8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnrc6aQ3UHK8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms