Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q3U1D9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Q3U1D9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Q3U1D9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Q3U1D9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.08■□□□□ 0.64
Q3U1D9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Q3U1D9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Q3U1D9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.08■□□□□ 0.64
Q3U1D9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.08■□□□□ 0.64
Q3U1D9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Q3U1D9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q3U1D9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q3U1D9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q3U1D9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Q3U1D9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q3U1D9 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q3U1D9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.07■□□□□ 0.64
Q3U1D9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Q3U1D9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q3U1D9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Q3U1D9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q3U1D9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q3U1D9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q3U1D9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3U1D9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3U1D9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3U1D9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3U1D9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Q3U1D9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Q3U1D9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Q3U1D9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Q3U1D9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Q3U1D9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3U1D9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Q3U1D9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3U1D9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Q3U1D9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Q3U1D9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Q3U1D9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Q3U1D9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Q3U1D9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Q3U1D9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Q3U1D9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q3U1D9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.03■□□□□ 0.64
Q3U1D9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q3U1D9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Q3U1D9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q3U1D9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.02■□□□□ 0.64
Q3U1D9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q3U1D9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Q3U1D9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q3U1D9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.02■□□□□ 0.64
Q3U1D9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.02■□□□□ 0.64
Q3U1D9 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Q3U1D9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Q3U1D9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Q3U1D9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Q3U1D9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Q3U1D9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Q3U1D9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Q3U1D9 Gm42501-201ENSMUST00000200220 1026 ntBASIC19■□□□□ 0.63
Q3U1D9 Gm18755-201ENSMUST00000218030 1099 ntBASIC19■□□□□ 0.63
Q3U1D9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q3U1D9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q3U1D9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q3U1D9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Q3U1D9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19■□□□□ 0.63
Q3U1D9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q3U1D9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q3U1D9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.99■□□□□ 0.63
Q3U1D9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Q3U1D9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q3U1D9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q3U1D9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Q3U1D9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Q3U1D9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q3U1D9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Q3U1D9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.98■□□□□ 0.63
Q3U1D9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.98■□□□□ 0.63
Q3U1D9 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.98■□□□□ 0.63
Q3U1D9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Q3U1D9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3U1D9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Q3U1D9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3U1D9 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.97■□□□□ 0.63
Q3U1D9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3U1D9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.97■□□□□ 0.63
Q3U1D9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Q3U1D9 Rps24-207ENSMUST00000224568 714 ntBASIC18.96■□□□□ 0.63
Q3U1D9 Gm10232-201ENSMUST00000089221 720 ntBASIC18.96■□□□□ 0.63
Q3U1D9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Q3U1D9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Q3U1D9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q3U1D9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Q3U1D9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q3U1D9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Q3U1D9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Q3U1D9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Q3U1D9 Gm22567-201ENSMUST00000175542 342 ntBASIC18.95■□□□□ 0.62
Q3U1D9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms