Protein–RNA interactions for Protein: Q15270

NKX1-1, NK1 transcription factor-related protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1Q15270 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
NKX1-1Q15270 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.69
NKX1-1Q15270 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.69
NKX1-1Q15270 AL449106.1-201ENST00000608517 1980 ntBASIC31.82■■■□□ 2.68
NKX1-1Q15270 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.82■■■□□ 2.68
NKX1-1Q15270 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC31.82■■■□□ 2.68
NKX1-1Q15270 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
NKX1-1Q15270 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
NKX1-1Q15270 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.81■■■□□ 2.68
NKX1-1Q15270 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.81■■■□□ 2.68
NKX1-1Q15270 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.81■■■□□ 2.68
NKX1-1Q15270 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.8■■■□□ 2.68
NKX1-1Q15270 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.8■■■□□ 2.68
NKX1-1Q15270 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.8■■■□□ 2.68
NKX1-1Q15270 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
NKX1-1Q15270 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
NKX1-1Q15270 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
NKX1-1Q15270 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
NKX1-1Q15270 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
NKX1-1Q15270 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
NKX1-1Q15270 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.79■■■□□ 2.68
NKX1-1Q15270 AC019069.1-201ENST00000610008 1333 ntBASIC31.79■■■□□ 2.68
NKX1-1Q15270 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
NKX1-1Q15270 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
NKX1-1Q15270 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.78■■■□□ 2.68
NKX1-1Q15270 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
NKX1-1Q15270 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
NKX1-1Q15270 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.77■■■□□ 2.68
NKX1-1Q15270 KRT18P10-201ENST00000388836 1287 ntBASIC31.77■■■□□ 2.68
NKX1-1Q15270 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
NKX1-1Q15270 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
NKX1-1Q15270 AC022616.5-201ENST00000518796 181 ntBASIC31.76■■■□□ 2.67
NKX1-1Q15270 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
NKX1-1Q15270 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
NKX1-1Q15270 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
NKX1-1Q15270 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NKX1-1Q15270 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
NKX1-1Q15270 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
NKX1-1Q15270 DRD5P2-201ENST00000421395 2012 ntBASIC31.75■■■□□ 2.67
NKX1-1Q15270 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
NKX1-1Q15270 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
NKX1-1Q15270 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
NKX1-1Q15270 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
NKX1-1Q15270 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.74■■■□□ 2.67
NKX1-1Q15270 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
NKX1-1Q15270 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
NKX1-1Q15270 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
NKX1-1Q15270 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
NKX1-1Q15270 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.73■■■□□ 2.67
NKX1-1Q15270 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.73■■■□□ 2.67
NKX1-1Q15270 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
NKX1-1Q15270 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
NKX1-1Q15270 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
NKX1-1Q15270 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.72■■■□□ 2.67
NKX1-1Q15270 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.72■■■□□ 2.67
NKX1-1Q15270 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
NKX1-1Q15270 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
NKX1-1Q15270 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.71■■■□□ 2.67
NKX1-1Q15270 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
NKX1-1Q15270 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
NKX1-1Q15270 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
NKX1-1Q15270 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
NKX1-1Q15270 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
NKX1-1Q15270 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.7■■■□□ 2.67
NKX1-1Q15270 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
NKX1-1Q15270 KRT18P24-201ENST00000344739 1156 ntBASIC31.69■■■□□ 2.66
NKX1-1Q15270 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.69■■■□□ 2.66
NKX1-1Q15270 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
NKX1-1Q15270 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
NKX1-1Q15270 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.68■■■□□ 2.66
NKX1-1Q15270 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.68■■■□□ 2.66
NKX1-1Q15270 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
NKX1-1Q15270 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.67■■■□□ 2.66
NKX1-1Q15270 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
NKX1-1Q15270 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
NKX1-1Q15270 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.67■■■□□ 2.66
NKX1-1Q15270 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.67■■■□□ 2.66
NKX1-1Q15270 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
NKX1-1Q15270 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.67■■■□□ 2.66
NKX1-1Q15270 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
NKX1-1Q15270 LINC01003-201ENST00000564834 1764 ntBASIC31.66■■■□□ 2.66
NKX1-1Q15270 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
NKX1-1Q15270 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.66■■■□□ 2.66
NKX1-1Q15270 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
NKX1-1Q15270 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
NKX1-1Q15270 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
NKX1-1Q15270 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.65■■■□□ 2.66
NKX1-1Q15270 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
NKX1-1Q15270 MIR4787-201ENST00000607364 84 ntBASIC31.64■■■□□ 2.66
NKX1-1Q15270 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
NKX1-1Q15270 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
NKX1-1Q15270 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
NKX1-1Q15270 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
NKX1-1Q15270 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
NKX1-1Q15270 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.62■■■□□ 2.65
NKX1-1Q15270 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
NKX1-1Q15270 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.62■■■□□ 2.65
NKX1-1Q15270 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.61■■■□□ 2.65
NKX1-1Q15270 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
NKX1-1Q15270 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.61■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms