Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YLL066CYLL066C 3618 nt9.6□□□□□ -0.87
RKR1Q04781 YLL067CYLL067C 3618 nt9.6□□□□□ -0.87
RKR1Q04781 VMA16YHR026W 642 nt9.6□□□□□ -0.87
RKR1Q04781 tX(XXX)DtX(XXX)D 100 nt9.6□□□□□ -0.87
RKR1Q04781 YNR014WYNR014W 639 nt9.6□□□□□ -0.87
RKR1Q04781 HSP26YBR072W 645 nt9.6□□□□□ -0.87
RKR1Q04781 AFG1YEL052W 1530 nt9.6□□□□□ -0.87
RKR1Q04781 POP5YAL033W 522 nt9.59□□□□□ -0.87
RKR1Q04781 ERI1YPL096C-A 207 nt9.59□□□□□ -0.87
RKR1Q04781 DAP1YPL170W 459 nt9.59□□□□□ -0.87
RKR1Q04781 YLR123CYLR123C 330 nt9.58□□□□□ -0.88
RKR1Q04781 ATG12YBR217W 561 nt9.58□□□□□ -0.88
RKR1Q04781 YCK1YHR135C 1617 nt9.58□□□□□ -0.88
RKR1Q04781 MCH2YKL221W 1422 nt9.58□□□□□ -0.88
RKR1Q04781 MRK1YDL079C 1506 nt9.58□□□□□ -0.88
RKR1Q04781 CDC34YDR054C 888 nt9.58□□□□□ -0.88
RKR1Q04781 TAH11YJR046W 1815 nt9.57□□□□□ -0.88
RKR1Q04781 YFR034W-AYFR034W-A 288 nt9.57□□□□□ -0.88
RKR1Q04781 IES2YNL215W 963 nt9.57□□□□□ -0.88
RKR1Q04781 UTR2YEL040W 1404 nt9.56□□□□□ -0.88
RKR1Q04781 MCH1YDL054C 1461 nt9.56□□□□□ -0.88
RKR1Q04781 PUF3YLL013C 2640 nt9.56□□□□□ -0.88
RKR1Q04781 SLA2YNL243W 2907 nt9.56□□□□□ -0.88
RKR1Q04781 GPB2YAL056W 2643 nt9.55□□□□□ -0.88
RKR1Q04781 tR(ACG)JtR(ACG)J 73 nt9.55□□□□□ -0.88
RKR1Q04781 YRF1-1YDR545W 5391 nt9.54□□□□□ -0.88
RKR1Q04781 YRF1-5YLR467W 5391 nt9.54□□□□□ -0.88
RKR1Q04781 YRF1-8YOR396W 5391 nt9.54□□□□□ -0.88
RKR1Q04781 TKL2YBR117C 2046 nt9.53□□□□□ -0.88
RKR1Q04781 ITR1YDR497C 1755 nt9.53□□□□□ -0.88
RKR1Q04781 QCR6YFR033C 444 nt9.53□□□□□ -0.88
RKR1Q04781 YGR022CYGR022C 330 nt9.53□□□□□ -0.88
RKR1Q04781 YLR283WYLR283W 945 nt9.53□□□□□ -0.88
RKR1Q04781 SNO4YMR322C 714 nt9.53□□□□□ -0.88
RKR1Q04781 MRPL22YNL177C 930 nt9.53□□□□□ -0.88
RKR1Q04781 HSP33YOR391C 714 nt9.53□□□□□ -0.88
RKR1Q04781 HSP32YPL280W 714 nt9.53□□□□□ -0.88
RKR1Q04781 VID30YGL227W 2877 nt9.52□□□□□ -0.88
RKR1Q04781 SYN8YAL014C 768 nt9.52□□□□□ -0.89
RKR1Q04781 YKR032WYKR032W 315 nt9.52□□□□□ -0.89
RKR1Q04781 LST8YNL006W 912 nt9.52□□□□□ -0.89
RKR1Q04781 PRI2YKL045W 1587 nt9.52□□□□□ -0.89
RKR1Q04781 TEA1YOR337W 2280 nt9.51□□□□□ -0.89
RKR1Q04781 MDM31YHR194W 1740 nt9.51□□□□□ -0.89
RKR1Q04781 COX16YJL003W 357 nt9.51□□□□□ -0.89
RKR1Q04781 ADE13YLR359W 1449 nt9.51□□□□□ -0.89
RKR1Q04781 TSA1YML028W 591 nt9.5□□□□□ -0.89
RKR1Q04781 CYB2YML054C 1776 nt9.5□□□□□ -0.89
RKR1Q04781 PKC1YBL105C 3456 nt9.5□□□□□ -0.89
RKR1Q04781 GSH1YJL101C 2037 nt9.49□□□□□ -0.89
RKR1Q04781 YEL068CYEL068C 333 nt9.49□□□□□ -0.89
RKR1Q04781 SFC1YJR095W 969 nt9.49□□□□□ -0.89
RKR1Q04781 ERG3YLR056W 1098 nt9.48□□□□□ -0.89
RKR1Q04781 HAP3YBL021C 435 nt9.48□□□□□ -0.89
RKR1Q04781 YMR253CYMR253C 1245 nt9.48□□□□□ -0.89
RKR1Q04781 YPR114WYPR114W 948 nt9.48□□□□□ -0.89
RKR1Q04781 PAC10YGR078C 600 nt9.47□□□□□ -0.89
RKR1Q04781 PEX13YLR191W 1161 nt9.47□□□□□ -0.89
RKR1Q04781 BNA3YJL060W 1335 nt9.46□□□□□ -0.89
RKR1Q04781 RPL5YPL131W 894 nt9.46□□□□□ -0.89
RKR1Q04781 RFC1YOR217W 2586 nt9.46□□□□□ -0.9
RKR1Q04781 LDS1YAL018C 978 nt9.46□□□□□ -0.9
RKR1Q04781 YNR075C-AYNR075C-A 93 nt9.46□□□□□ -0.9
RKR1Q04781 KTR1YOR099W 1182 nt9.46□□□□□ -0.9
RKR1Q04781 UBC11YOR339C 471 nt9.46□□□□□ -0.9
RKR1Q04781 RAD24YER173W 1980 nt9.45□□□□□ -0.9
RKR1Q04781 DCN1YLR128W 810 nt9.45□□□□□ -0.9
RKR1Q04781 YNL019CYNL019C 855 nt9.45□□□□□ -0.9
RKR1Q04781 YNL033WYNL033W 855 nt9.45□□□□□ -0.9
RKR1Q04781 GPH1YPR160W 2709 nt9.45□□□□□ -0.9
RKR1Q04781 ARP2YDL029W 1176 nt9.44□□□□□ -0.9
RKR1Q04781 KNH1YDL049C 807 nt9.44□□□□□ -0.9
RKR1Q04781 CBP4YGR174C 513 nt9.44□□□□□ -0.9
RKR1Q04781 YIR042CYIR042C 711 nt9.44□□□□□ -0.9
RKR1Q04781 THI2YBR240C 1353 nt9.44□□□□□ -0.9
RKR1Q04781 RGT2YDL138W 2292 nt9.43□□□□□ -0.9
RKR1Q04781 YCR047W-AYCR047W-A 207 nt9.43□□□□□ -0.9
RKR1Q04781 YFL064CYFL064C 525 nt9.43□□□□□ -0.9
RKR1Q04781 YPR202WYPR202W 717 nt9.43□□□□□ -0.9
RKR1Q04781 RPL21AYBR191W 483 nt9.43□□□□□ -0.9
RKR1Q04781 YMR155WYMR155W 1644 nt9.43□□□□□ -0.9
RKR1Q04781 IME2YJL106W 1938 nt9.42□□□□□ -0.9
RKR1Q04781 MDH3YDL078C 1032 nt9.41□□□□□ -0.9
RKR1Q04781 YNR042WYNR042W 429 nt9.41□□□□□ -0.9
RKR1Q04781 HSM3YBR272C 1443 nt9.4□□□□□ -0.9
RKR1Q04781 MRPS16YPL013C 366 nt9.4□□□□□ -0.9
RKR1Q04781 YDL114WYDL114W 927 nt9.39□□□□□ -0.91
RKR1Q04781 TRR1YDR353W 960 nt9.39□□□□□ -0.91
RKR1Q04781 YAL056C-AYAL056C-A 351 nt9.39□□□□□ -0.91
RKR1Q04781 YLR194CYLR194C 765 nt9.39□□□□□ -0.91
RKR1Q04781 CAR1YPL111W 1002 nt9.39□□□□□ -0.91
RKR1Q04781 NTG1YAL015C 1200 nt9.37□□□□□ -0.91
RKR1Q04781 WHI2YOR043W 1461 nt9.37□□□□□ -0.91
RKR1Q04781 MCM3YEL032W 2916 nt9.37□□□□□ -0.91
RKR1Q04781 YJR015WYJR015W 1533 nt9.37□□□□□ -0.91
RKR1Q04781 SFP1YLR403W 2052 nt9.37□□□□□ -0.91
RKR1Q04781 RRP4YHR069C 1080 nt9.37□□□□□ -0.91
RKR1Q04781 QCR8YJL166W 285 nt9.37□□□□□ -0.91
RKR1Q04781 HCR1YLR192C 798 nt9.37□□□□□ -0.91
RKR1Q04781 YMR119W-AYMR119W-A 375 nt9.37□□□□□ -0.91
Retrieved 100 of 7,029 protein–RNA pairs in 36.1 ms