Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBM3P98179 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBM3P98179 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
RBM3P98179 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RBM3P98179 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RBM3P98179 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBM3P98179 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBM3P98179 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RBM3P98179 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBM3P98179 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBM3P98179 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBM3P98179 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBM3P98179 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RBM3P98179 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RBM3P98179 AL139125.2-201ENST00000623134 1869 ntBASIC15.22■□□□□ 0.03
RBM3P98179 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RBM3P98179 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RBM3P98179 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBM3P98179 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC15.21■□□□□ 0.03
RBM3P98179 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RBM3P98179 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RBM3P98179 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC15.21■□□□□ 0.03
RBM3P98179 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
RBM3P98179 AP004609.3-201ENST00000610705 1884 ntBASIC15.21■□□□□ 0.03
RBM3P98179 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RBM3P98179 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.21■□□□□ 0.02
RBM3P98179 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC15.21■□□□□ 0.02
RBM3P98179 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RBM3P98179 MED17-227ENST00000640521 2047 ntTSL 5 BASIC15.21■□□□□ 0.02
RBM3P98179 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RBM3P98179 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RBM3P98179 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RBM3P98179 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RBM3P98179 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RBM3P98179 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC15.19■□□□□ 0.02
RBM3P98179 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RBM3P98179 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RBM3P98179 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RBM3P98179 AC138932.1-201ENST00000534164 6830 ntBASIC15.19■□□□□ 0.02
RBM3P98179 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RBM3P98179 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBM3P98179 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBM3P98179 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBM3P98179 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBM3P98179 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBM3P98179 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBM3P98179 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RBM3P98179 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBM3P98179 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RBM3P98179 AC068473.5-201ENST00000616428 2072 ntBASIC15.17■□□□□ 0.02
RBM3P98179 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC15.17■□□□□ 0.02
RBM3P98179 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBM3P98179 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBM3P98179 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBM3P98179 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBM3P98179 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RBM3P98179 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RBM3P98179 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC15.17■□□□□ 0.02
RBM3P98179 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBM3P98179 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBM3P98179 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBM3P98179 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RBM3P98179 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RBM3P98179 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBM3P98179 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBM3P98179 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBM3P98179 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBM3P98179 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC15.16■□□□□ 0.02
RBM3P98179 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBM3P98179 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBM3P98179 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
RBM3P98179 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC15.15■□□□□ 0.02
RBM3P98179 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBM3P98179 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBM3P98179 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RBM3P98179 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBM3P98179 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC15.15■□□□□ 0.02
RBM3P98179 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC15.15■□□□□ 0.02
RBM3P98179 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBM3P98179 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RBM3P98179 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBM3P98179 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBM3P98179 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBM3P98179 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBM3P98179 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBM3P98179 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
RBM3P98179 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBM3P98179 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC15.13■□□□□ 0.01
RBM3P98179 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RBM3P98179 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBM3P98179 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RBM3P98179 AC022211.4-201ENST00000625094 2161 ntBASIC15.13■□□□□ 0.01
RBM3P98179 AC138932.3-201ENST00000567634 1902 ntBASIC15.13■□□□□ 0.01
RBM3P98179 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBM3P98179 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBM3P98179 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBM3P98179 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RBM3P98179 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RBM3P98179 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC15.12■□□□□ 0.01
RBM3P98179 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms