Protein–RNA interactions for Protein: P97454

Smad5, Mothers against decapentaplegic homolog 5, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad5P97454 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smad5P97454 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smad5P97454 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.65■□□□□ 0.9
Smad5P97454 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smad5P97454 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Smad5P97454 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smad5P97454 Gm22567-201ENSMUST00000175542 342 ntBASIC20.64■□□□□ 0.89
Smad5P97454 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smad5P97454 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Smad5P97454 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smad5P97454 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Smad5P97454 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smad5P97454 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Smad5P97454 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.63■□□□□ 0.89
Smad5P97454 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smad5P97454 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smad5P97454 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.63■□□□□ 0.89
Smad5P97454 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smad5P97454 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smad5P97454 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Smad5P97454 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.62■□□□□ 0.89
Smad5P97454 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Smad5P97454 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smad5P97454 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Smad5P97454 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Smad5P97454 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.61■□□□□ 0.89
Smad5P97454 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smad5P97454 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smad5P97454 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smad5P97454 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.61■□□□□ 0.89
Smad5P97454 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.61■□□□□ 0.89
Smad5P97454 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Smad5P97454 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smad5P97454 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Smad5P97454 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smad5P97454 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smad5P97454 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.6■□□□□ 0.89
Smad5P97454 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Smad5P97454 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smad5P97454 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smad5P97454 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Smad5P97454 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smad5P97454 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smad5P97454 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Smad5P97454 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smad5P97454 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smad5P97454 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.58■□□□□ 0.89
Smad5P97454 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smad5P97454 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.58■□□□□ 0.88
Smad5P97454 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smad5P97454 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smad5P97454 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smad5P97454 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Smad5P97454 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smad5P97454 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smad5P97454 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smad5P97454 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smad5P97454 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smad5P97454 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smad5P97454 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smad5P97454 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smad5P97454 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Smad5P97454 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smad5P97454 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smad5P97454 Gm43566-201ENSMUST00000196851 808 ntBASIC20.54■□□□□ 0.88
Smad5P97454 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Smad5P97454 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smad5P97454 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Smad5P97454 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smad5P97454 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smad5P97454 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smad5P97454 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smad5P97454 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Smad5P97454 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.53■□□□□ 0.88
Smad5P97454 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smad5P97454 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smad5P97454 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smad5P97454 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smad5P97454 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smad5P97454 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smad5P97454 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Smad5P97454 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smad5P97454 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.52■□□□□ 0.88
Smad5P97454 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Smad5P97454 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.52■□□□□ 0.88
Smad5P97454 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Smad5P97454 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.52■□□□□ 0.88
Smad5P97454 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Smad5P97454 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Smad5P97454 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smad5P97454 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smad5P97454 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.51■□□□□ 0.87
Smad5P97454 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smad5P97454 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smad5P97454 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.51■□□□□ 0.87
Smad5P97454 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.51■□□□□ 0.87
Smad5P97454 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smad5P97454 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smad5P97454 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smad5P97454 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms