Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NKX6-1P78426 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NKX6-1P78426 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NKX6-1P78426 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.15■□□□□ 0.98
NKX6-1P78426 RP9P-202ENST00000450133 1212 ntBASIC21.15■□□□□ 0.98
NKX6-1P78426 AC139795.1-202ENST00000500444 432 ntBASIC21.15■□□□□ 0.98
NKX6-1P78426 MIR3960-201ENST00000583311 91 ntBASIC21.15■□□□□ 0.98
NKX6-1P78426 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NKX6-1P78426 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NKX6-1P78426 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NKX6-1P78426 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.14■□□□□ 0.98
NKX6-1P78426 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NKX6-1P78426 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NKX6-1P78426 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NKX6-1P78426 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.14■□□□□ 0.97
NKX6-1P78426 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NKX6-1P78426 YBX1P4-201ENST00000392794 808 ntBASIC21.14■□□□□ 0.97
NKX6-1P78426 AC131212.1-201ENST00000613771 668 ntBASIC21.14■□□□□ 0.97
NKX6-1P78426 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
NKX6-1P78426 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NKX6-1P78426 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NKX6-1P78426 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NKX6-1P78426 AC009299.2-201ENST00000482477 511 ntBASIC21.13■□□□□ 0.97
NKX6-1P78426 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.13■□□□□ 0.97
NKX6-1P78426 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NKX6-1P78426 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NKX6-1P78426 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NKX6-1P78426 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NKX6-1P78426 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
NKX6-1P78426 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NKX6-1P78426 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NKX6-1P78426 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NKX6-1P78426 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NKX6-1P78426 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NKX6-1P78426 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.11■□□□□ 0.97
NKX6-1P78426 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NKX6-1P78426 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NKX6-1P78426 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.11■□□□□ 0.97
NKX6-1P78426 AC093536.1-201ENST00000569153 554 ntBASIC21.11■□□□□ 0.97
NKX6-1P78426 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NKX6-1P78426 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NKX6-1P78426 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NKX6-1P78426 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.11■□□□□ 0.97
NKX6-1P78426 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NKX6-1P78426 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NKX6-1P78426 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NKX6-1P78426 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NKX6-1P78426 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.1■□□□□ 0.97
NKX6-1P78426 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NKX6-1P78426 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NKX6-1P78426 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NKX6-1P78426 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.09■□□□□ 0.97
NKX6-1P78426 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.09■□□□□ 0.97
NKX6-1P78426 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.09■□□□□ 0.97
NKX6-1P78426 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.09■□□□□ 0.97
NKX6-1P78426 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NKX6-1P78426 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NKX6-1P78426 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NKX6-1P78426 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NKX6-1P78426 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
NKX6-1P78426 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.08■□□□□ 0.97
NKX6-1P78426 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NKX6-1P78426 RAP2CP1-202ENST00000605179 643 ntBASIC21.08■□□□□ 0.97
NKX6-1P78426 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
NKX6-1P78426 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
NKX6-1P78426 AC142472.1-201ENST00000612013 1741 ntBASIC21.07■□□□□ 0.96
NKX6-1P78426 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NKX6-1P78426 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
NKX6-1P78426 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NKX6-1P78426 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NKX6-1P78426 MIR6765-201ENST00000614092 87 ntBASIC21.07■□□□□ 0.96
NKX6-1P78426 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NKX6-1P78426 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NKX6-1P78426 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NKX6-1P78426 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NKX6-1P78426 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NKX6-1P78426 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NKX6-1P78426 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NKX6-1P78426 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
NKX6-1P78426 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NKX6-1P78426 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.06■□□□□ 0.96
NKX6-1P78426 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NKX6-1P78426 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NKX6-1P78426 SPCS2P3-201ENST00000500401 656 ntBASIC21.06■□□□□ 0.96
NKX6-1P78426 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NKX6-1P78426 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
NKX6-1P78426 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NKX6-1P78426 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.06■□□□□ 0.96
NKX6-1P78426 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NKX6-1P78426 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.05■□□□□ 0.96
NKX6-1P78426 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NKX6-1P78426 THA1P-201ENST00000590384 1145 ntBASIC21.05■□□□□ 0.96
NKX6-1P78426 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.05■□□□□ 0.96
NKX6-1P78426 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.05■□□□□ 0.96
NKX6-1P78426 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.05■□□□□ 0.96
NKX6-1P78426 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
NKX6-1P78426 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NKX6-1P78426 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NKX6-1P78426 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NKX6-1P78426 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms