Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.93■□□□□ 0.78
Vbp1P61759 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.92■□□□□ 0.78
Vbp1P61759 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Vbp1P61759 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Vbp1P61759 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vbp1P61759 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.91■□□□□ 0.78
Vbp1P61759 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vbp1P61759 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vbp1P61759 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vbp1P61759 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Vbp1P61759 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vbp1P61759 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Vbp1P61759 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Vbp1P61759 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Vbp1P61759 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vbp1P61759 Gm8109-201ENSMUST00000194076 746 ntBASIC19.9■□□□□ 0.78
Vbp1P61759 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.9■□□□□ 0.78
Vbp1P61759 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vbp1P61759 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Vbp1P61759 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Vbp1P61759 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Vbp1P61759 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
Vbp1P61759 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vbp1P61759 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vbp1P61759 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Vbp1P61759 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Vbp1P61759 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.88■□□□□ 0.77
Vbp1P61759 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Vbp1P61759 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Vbp1P61759 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Vbp1P61759 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.87■□□□□ 0.77
Vbp1P61759 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Vbp1P61759 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Vbp1P61759 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Vbp1P61759 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vbp1P61759 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Vbp1P61759 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Vbp1P61759 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.86■□□□□ 0.77
Vbp1P61759 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vbp1P61759 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Vbp1P61759 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Vbp1P61759 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vbp1P61759 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Vbp1P61759 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Vbp1P61759 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Vbp1P61759 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vbp1P61759 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vbp1P61759 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Vbp1P61759 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Vbp1P61759 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Vbp1P61759 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Vbp1P61759 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vbp1P61759 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vbp1P61759 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vbp1P61759 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Vbp1P61759 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vbp1P61759 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vbp1P61759 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vbp1P61759 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Vbp1P61759 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vbp1P61759 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vbp1P61759 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Vbp1P61759 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
Vbp1P61759 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vbp1P61759 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vbp1P61759 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.81■□□□□ 0.76
Vbp1P61759 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.81■□□□□ 0.76
Vbp1P61759 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vbp1P61759 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
Vbp1P61759 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Vbp1P61759 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vbp1P61759 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Vbp1P61759 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Vbp1P61759 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vbp1P61759 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vbp1P61759 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Vbp1P61759 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vbp1P61759 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Vbp1P61759 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Vbp1P61759 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Vbp1P61759 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vbp1P61759 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vbp1P61759 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Vbp1P61759 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Vbp1P61759 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Vbp1P61759 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Vbp1P61759 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Vbp1P61759 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Vbp1P61759 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vbp1P61759 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vbp1P61759 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vbp1P61759 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.77■□□□□ 0.76
Vbp1P61759 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Vbp1P61759 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Vbp1P61759 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Vbp1P61759 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vbp1P61759 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vbp1P61759 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Vbp1P61759 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Vbp1P61759 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms