Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec61a1P61620 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sec61a1P61620 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.13■□□□□ 0.65
Sec61a1P61620 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.12■□□□□ 0.65
Sec61a1P61620 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec61a1P61620 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec61a1P61620 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sec61a1P61620 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.12■□□□□ 0.65
Sec61a1P61620 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Sec61a1P61620 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sec61a1P61620 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sec61a1P61620 Mir6538-201ENSMUST00000183713 110 ntBASIC19.11■□□□□ 0.65
Sec61a1P61620 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.11■□□□□ 0.65
Sec61a1P61620 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Sec61a1P61620 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sec61a1P61620 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sec61a1P61620 Scarna2-201ENSMUST00000157560 414 ntBASIC19.1■□□□□ 0.65
Sec61a1P61620 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sec61a1P61620 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sec61a1P61620 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Sec61a1P61620 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sec61a1P61620 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sec61a1P61620 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sec61a1P61620 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sec61a1P61620 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.09■□□□□ 0.65
Sec61a1P61620 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sec61a1P61620 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sec61a1P61620 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sec61a1P61620 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sec61a1P61620 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Sec61a1P61620 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Sec61a1P61620 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sec61a1P61620 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Sec61a1P61620 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
Sec61a1P61620 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Sec61a1P61620 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.08■□□□□ 0.65
Sec61a1P61620 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sec61a1P61620 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sec61a1P61620 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Sec61a1P61620 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.07■□□□□ 0.64
Sec61a1P61620 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sec61a1P61620 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.07■□□□□ 0.64
Sec61a1P61620 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sec61a1P61620 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sec61a1P61620 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sec61a1P61620 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.07■□□□□ 0.64
Sec61a1P61620 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sec61a1P61620 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sec61a1P61620 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sec61a1P61620 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sec61a1P61620 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sec61a1P61620 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.06■□□□□ 0.64
Sec61a1P61620 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sec61a1P61620 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Sec61a1P61620 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sec61a1P61620 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sec61a1P61620 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sec61a1P61620 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sec61a1P61620 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sec61a1P61620 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sec61a1P61620 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.05■□□□□ 0.64
Sec61a1P61620 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Sec61a1P61620 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sec61a1P61620 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Sec61a1P61620 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sec61a1P61620 Notumos-201ENSMUST00000151998 2659 ntBASIC19.04■□□□□ 0.64
Sec61a1P61620 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sec61a1P61620 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sec61a1P61620 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sec61a1P61620 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sec61a1P61620 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sec61a1P61620 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.03■□□□□ 0.64
Sec61a1P61620 Gm16437-201ENSMUST00000025669 507 ntBASIC19.03■□□□□ 0.64
Sec61a1P61620 Gm9806-201ENSMUST00000051080 552 ntBASIC19.03■□□□□ 0.64
Sec61a1P61620 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sec61a1P61620 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.03■□□□□ 0.64
Sec61a1P61620 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.03■□□□□ 0.64
Sec61a1P61620 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sec61a1P61620 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sec61a1P61620 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sec61a1P61620 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.02■□□□□ 0.64
Sec61a1P61620 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sec61a1P61620 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sec61a1P61620 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
Sec61a1P61620 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sec61a1P61620 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Sec61a1P61620 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sec61a1P61620 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sec61a1P61620 Gm11687-201ENSMUST00000118911 886 ntBASIC19.01■□□□□ 0.63
Sec61a1P61620 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.01■□□□□ 0.63
Sec61a1P61620 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sec61a1P61620 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sec61a1P61620 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sec61a1P61620 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sec61a1P61620 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sec61a1P61620 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sec61a1P61620 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Sec61a1P61620 Gm12818-201ENSMUST00000117562 1349 ntBASIC19■□□□□ 0.63
Sec61a1P61620 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sec61a1P61620 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms