Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.89■■□□□ 1.41
SRP54P61011 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.89■■□□□ 1.41
SRP54P61011 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
SRP54P61011 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.89■■□□□ 1.41
SRP54P61011 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
SRP54P61011 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SRP54P61011 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SRP54P61011 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.88■■□□□ 1.41
SRP54P61011 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.88■■□□□ 1.41
SRP54P61011 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.88■■□□□ 1.41
SRP54P61011 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.88■■□□□ 1.41
SRP54P61011 KRT8P33-201ENST00000508125 1423 ntBASIC23.87■■□□□ 1.41
SRP54P61011 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SRP54P61011 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
SRP54P61011 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SRP54P61011 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SRP54P61011 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.86■■□□□ 1.41
SRP54P61011 PVT1_1.1-201ENST00000615125 194 ntBASIC23.86■■□□□ 1.41
SRP54P61011 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SRP54P61011 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
SRP54P61011 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SRP54P61011 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SRP54P61011 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SRP54P61011 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SRP54P61011 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SRP54P61011 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRP54P61011 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRP54P61011 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRP54P61011 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
SRP54P61011 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRP54P61011 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRP54P61011 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SRP54P61011 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SRP54P61011 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRP54P61011 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRP54P61011 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
SRP54P61011 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
SRP54P61011 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
SRP54P61011 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SRP54P61011 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.82■■□□□ 1.4
SRP54P61011 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SRP54P61011 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SRP54P61011 YBX1P4-201ENST00000392794 808 ntBASIC23.82■■□□□ 1.4
SRP54P61011 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SRP54P61011 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.82■■□□□ 1.4
SRP54P61011 AC087393.1-201ENST00000582896 145 ntBASIC23.82■■□□□ 1.4
SRP54P61011 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.81■■□□□ 1.4
SRP54P61011 RPS2P7-201ENST00000447334 885 ntBASIC23.81■■□□□ 1.4
SRP54P61011 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SRP54P61011 AC103834.1-201ENST00000520383 144 ntBASIC23.81■■□□□ 1.4
SRP54P61011 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.81■■□□□ 1.4
SRP54P61011 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.81■■□□□ 1.4
SRP54P61011 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SRP54P61011 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.81■■□□□ 1.4
SRP54P61011 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SRP54P61011 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.8■■□□□ 1.4
SRP54P61011 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SRP54P61011 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC23.8■■□□□ 1.4
SRP54P61011 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.8■■□□□ 1.4
SRP54P61011 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SRP54P61011 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SRP54P61011 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.8■■□□□ 1.4
SRP54P61011 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.79■■□□□ 1.4
SRP54P61011 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRP54P61011 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRP54P61011 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SRP54P61011 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRP54P61011 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.79■■□□□ 1.4
SRP54P61011 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRP54P61011 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.79■■□□□ 1.4
SRP54P61011 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SRP54P61011 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.78■■□□□ 1.4
SRP54P61011 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SRP54P61011 AL451085.2-201ENST00000605085 799 ntBASIC23.78■■□□□ 1.4
SRP54P61011 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SRP54P61011 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SRP54P61011 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SRP54P61011 KRT18P10-201ENST00000388836 1287 ntBASIC23.77■■□□□ 1.4
SRP54P61011 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SRP54P61011 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SRP54P61011 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SRP54P61011 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SRP54P61011 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SRP54P61011 MIR4508-201ENST00000584178 70 ntBASIC23.76■■□□□ 1.39
SRP54P61011 AC019171.1-201ENST00000601251 1056 ntBASIC23.76■■□□□ 1.39
SRP54P61011 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SRP54P61011 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.75■■□□□ 1.39
SRP54P61011 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
SRP54P61011 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SRP54P61011 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SRP54P61011 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.74■■□□□ 1.39
SRP54P61011 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SRP54P61011 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
SRP54P61011 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.73■■□□□ 1.39
SRP54P61011 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SRP54P61011 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.73■■□□□ 1.39
SRP54P61011 AL035685.1-201ENST00000636663 812 ntBASIC23.73■■□□□ 1.39
SRP54P61011 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SRP54P61011 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SRP54P61011 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms