Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh11P55288 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh11P55288 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh11P55288 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh11P55288 Cap2-205ENSMUST00000225824 1634 ntBASIC19.84■□□□□ 0.77
Cdh11P55288 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.84■□□□□ 0.77
Cdh11P55288 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.84■□□□□ 0.77
Cdh11P55288 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cdh11P55288 Gm16437-201ENSMUST00000025669 507 ntBASIC19.84■□□□□ 0.77
Cdh11P55288 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh11P55288 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh11P55288 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh11P55288 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdh11P55288 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh11P55288 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh11P55288 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh11P55288 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cdh11P55288 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.82■□□□□ 0.76
Cdh11P55288 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh11P55288 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh11P55288 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh11P55288 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.82■□□□□ 0.76
Cdh11P55288 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cdh11P55288 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh11P55288 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.81■□□□□ 0.76
Cdh11P55288 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh11P55288 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh11P55288 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cdh11P55288 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdh11P55288 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh11P55288 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cdh11P55288 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.8■□□□□ 0.76
Cdh11P55288 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh11P55288 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdh11P55288 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.8■□□□□ 0.76
Cdh11P55288 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cdh11P55288 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh11P55288 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh11P55288 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.79■□□□□ 0.76
Cdh11P55288 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh11P55288 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh11P55288 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh11P55288 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdh11P55288 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh11P55288 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.78■□□□□ 0.76
Cdh11P55288 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.78■□□□□ 0.76
Cdh11P55288 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.78■□□□□ 0.76
Cdh11P55288 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.78■□□□□ 0.76
Cdh11P55288 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh11P55288 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdh11P55288 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cdh11P55288 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh11P55288 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdh11P55288 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.77■□□□□ 0.76
Cdh11P55288 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.77■□□□□ 0.75
Cdh11P55288 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cdh11P55288 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh11P55288 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh11P55288 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cdh11P55288 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cdh11P55288 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh11P55288 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh11P55288 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cdh11P55288 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh11P55288 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh11P55288 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cdh11P55288 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.74■□□□□ 0.75
Cdh11P55288 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh11P55288 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cdh11P55288 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cdh11P55288 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh11P55288 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh11P55288 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.73■□□□□ 0.75
Cdh11P55288 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.73■□□□□ 0.75
Cdh11P55288 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cdh11P55288 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
Cdh11P55288 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh11P55288 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cdh11P55288 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh11P55288 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh11P55288 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cdh11P55288 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh11P55288 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cdh11P55288 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cdh11P55288 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh11P55288 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh11P55288 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cdh11P55288 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.74
Cdh11P55288 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh11P55288 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.7■□□□□ 0.74
Cdh11P55288 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Cdh11P55288 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.7■□□□□ 0.74
Cdh11P55288 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.7■□□□□ 0.74
Cdh11P55288 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.7■□□□□ 0.74
Cdh11P55288 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cdh11P55288 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh11P55288 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh11P55288 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh11P55288 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cdh11P55288 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 120.9 ms