Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.43□□□□□ -0.1
Xcl1P47993 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xcl1P47993 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xcl1P47993 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xcl1P47993 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xcl1P47993 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC14.43□□□□□ -0.1
Xcl1P47993 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC14.43□□□□□ -0.1
Xcl1P47993 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xcl1P47993 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Xcl1P47993 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Xcl1P47993 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Xcl1P47993 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Xcl1P47993 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xcl1P47993 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Xcl1P47993 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Xcl1P47993 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xcl1P47993 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xcl1P47993 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xcl1P47993 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Xcl1P47993 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xcl1P47993 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xcl1P47993 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Xcl1P47993 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xcl1P47993 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Xcl1P47993 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.41□□□□□ -0.1
Xcl1P47993 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Xcl1P47993 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Xcl1P47993 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xcl1P47993 Hsf1-207ENSMUST00000228371 2102 ntBASIC14.4□□□□□ -0.1
Xcl1P47993 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xcl1P47993 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Xcl1P47993 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Xcl1P47993 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xcl1P47993 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Xcl1P47993 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.39□□□□□ -0.11
Xcl1P47993 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xcl1P47993 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xcl1P47993 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Xcl1P47993 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.39□□□□□ -0.11
Xcl1P47993 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xcl1P47993 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Xcl1P47993 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xcl1P47993 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Xcl1P47993 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xcl1P47993 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xcl1P47993 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xcl1P47993 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Xcl1P47993 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xcl1P47993 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xcl1P47993 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
Xcl1P47993 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xcl1P47993 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Xcl1P47993 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xcl1P47993 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xcl1P47993 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Xcl1P47993 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xcl1P47993 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC14.37□□□□□ -0.11
Xcl1P47993 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xcl1P47993 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Xcl1P47993 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Xcl1P47993 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Xcl1P47993 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Xcl1P47993 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.36□□□□□ -0.11
Xcl1P47993 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Xcl1P47993 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Xcl1P47993 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Xcl1P47993 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Xcl1P47993 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Xcl1P47993 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Xcl1P47993 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Xcl1P47993 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Xcl1P47993 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Xcl1P47993 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.35□□□□□ -0.11
Xcl1P47993 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Xcl1P47993 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xcl1P47993 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Xcl1P47993 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xcl1P47993 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Xcl1P47993 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xcl1P47993 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Xcl1P47993 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.34□□□□□ -0.11
Xcl1P47993 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Xcl1P47993 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Xcl1P47993 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Xcl1P47993 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xcl1P47993 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Xcl1P47993 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xcl1P47993 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xcl1P47993 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC14.33□□□□□ -0.12
Xcl1P47993 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Xcl1P47993 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Xcl1P47993 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Xcl1P47993 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xcl1P47993 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xcl1P47993 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Xcl1P47993 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Xcl1P47993 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Xcl1P47993 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Xcl1P47993 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Xcl1P47993 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 116.8 ms