Protein–RNA interactions for Protein: P29268

Ctgf, Connective tissue growth factor, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtgfP29268 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.55■□□□□ 0.88
CtgfP29268 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CtgfP29268 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CtgfP29268 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CtgfP29268 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CtgfP29268 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
CtgfP29268 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.54■□□□□ 0.88
CtgfP29268 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CtgfP29268 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.54■□□□□ 0.88
CtgfP29268 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CtgfP29268 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CtgfP29268 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CtgfP29268 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CtgfP29268 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CtgfP29268 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CtgfP29268 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CtgfP29268 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CtgfP29268 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CtgfP29268 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CtgfP29268 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.52■□□□□ 0.88
CtgfP29268 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CtgfP29268 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CtgfP29268 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CtgfP29268 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CtgfP29268 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CtgfP29268 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CtgfP29268 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.5■□□□□ 0.87
CtgfP29268 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.5■□□□□ 0.87
CtgfP29268 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CtgfP29268 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CtgfP29268 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CtgfP29268 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CtgfP29268 Gm5921-201ENSMUST00000075898 882 ntBASIC20.5■□□□□ 0.87
CtgfP29268 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CtgfP29268 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CtgfP29268 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CtgfP29268 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.49■□□□□ 0.87
CtgfP29268 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.49■□□□□ 0.87
CtgfP29268 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CtgfP29268 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CtgfP29268 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CtgfP29268 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.48■□□□□ 0.87
CtgfP29268 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.48■□□□□ 0.87
CtgfP29268 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CtgfP29268 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CtgfP29268 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CtgfP29268 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CtgfP29268 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CtgfP29268 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CtgfP29268 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CtgfP29268 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CtgfP29268 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CtgfP29268 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CtgfP29268 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CtgfP29268 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
CtgfP29268 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CtgfP29268 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.45■□□□□ 0.86
CtgfP29268 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.44■□□□□ 0.86
CtgfP29268 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CtgfP29268 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CtgfP29268 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.44■□□□□ 0.86
CtgfP29268 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CtgfP29268 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CtgfP29268 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CtgfP29268 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CtgfP29268 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CtgfP29268 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CtgfP29268 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CtgfP29268 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CtgfP29268 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CtgfP29268 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CtgfP29268 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.42■□□□□ 0.86
CtgfP29268 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.42■□□□□ 0.86
CtgfP29268 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.42■□□□□ 0.86
CtgfP29268 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CtgfP29268 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CtgfP29268 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CtgfP29268 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CtgfP29268 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CtgfP29268 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.41■□□□□ 0.86
CtgfP29268 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.41■□□□□ 0.86
CtgfP29268 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CtgfP29268 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CtgfP29268 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CtgfP29268 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CtgfP29268 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CtgfP29268 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CtgfP29268 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CtgfP29268 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CtgfP29268 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CtgfP29268 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CtgfP29268 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.39■□□□□ 0.85
CtgfP29268 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CtgfP29268 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CtgfP29268 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CtgfP29268 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.38■□□□□ 0.85
CtgfP29268 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CtgfP29268 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CtgfP29268 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CtgfP29268 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms