Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.27■□□□□ 0.84
ACANP16112 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.26■□□□□ 0.83
ACANP16112 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.26■□□□□ 0.83
ACANP16112 AC137630.3-201ENST00000607245 391 ntBASIC20.26■□□□□ 0.83
ACANP16112 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ACANP16112 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACANP16112 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACANP16112 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACANP16112 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.26■□□□□ 0.83
ACANP16112 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ACANP16112 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACANP16112 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACANP16112 KRT18P24-201ENST00000344739 1156 ntBASIC20.25■□□□□ 0.83
ACANP16112 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.25■□□□□ 0.83
ACANP16112 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.25■□□□□ 0.83
ACANP16112 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACANP16112 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACANP16112 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.25■□□□□ 0.83
ACANP16112 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ACANP16112 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.24■□□□□ 0.83
ACANP16112 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.24■□□□□ 0.83
ACANP16112 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.24■□□□□ 0.83
ACANP16112 AP004833.2-201ENST00000532228 1454 ntBASIC20.24■□□□□ 0.83
ACANP16112 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACANP16112 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ACANP16112 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.23■□□□□ 0.83
ACANP16112 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACANP16112 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACANP16112 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACANP16112 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACANP16112 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ACANP16112 AC021242.3-201ENST00000607598 1377 ntBASIC20.23■□□□□ 0.83
ACANP16112 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.23■□□□□ 0.83
ACANP16112 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.23■□□□□ 0.83
ACANP16112 MIR5787-201ENST00000611784 55 ntBASIC20.23■□□□□ 0.83
ACANP16112 AL359504.2-201ENST00000605506 1601 ntBASIC20.22■□□□□ 0.83
ACANP16112 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.22■□□□□ 0.83
ACANP16112 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.22■□□□□ 0.83
ACANP16112 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ACANP16112 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.22■□□□□ 0.83
ACANP16112 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACANP16112 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
ACANP16112 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ACANP16112 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACANP16112 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
ACANP16112 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACANP16112 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
ACANP16112 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.19■□□□□ 0.82
ACANP16112 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACANP16112 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACANP16112 AL117332.1-201ENST00000622628 974 ntBASIC20.19■□□□□ 0.82
ACANP16112 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.18■□□□□ 0.82
ACANP16112 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACANP16112 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.18■□□□□ 0.82
ACANP16112 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ACANP16112 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ACANP16112 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACANP16112 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACANP16112 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ACANP16112 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ACANP16112 AC135279.3-201ENST00000610945 1311 ntBASIC20.17■□□□□ 0.82
ACANP16112 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.16■□□□□ 0.82
ACANP16112 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ACANP16112 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.15■□□□□ 0.82
ACANP16112 AL512631.2-201ENST00000604634 923 ntBASIC20.15■□□□□ 0.82
ACANP16112 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ACANP16112 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
ACANP16112 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACANP16112 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACANP16112 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.15■□□□□ 0.82
ACANP16112 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.15■□□□□ 0.82
ACANP16112 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACANP16112 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ACANP16112 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ACANP16112 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.14■□□□□ 0.82
ACANP16112 ABCB10P3-201ENST00000561950 2166 ntBASIC20.14■□□□□ 0.82
ACANP16112 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
ACANP16112 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ACANP16112 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ACANP16112 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ACANP16112 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.14■□□□□ 0.82
ACANP16112 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.14■□□□□ 0.81
ACANP16112 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.14■□□□□ 0.81
ACANP16112 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
ACANP16112 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.14■□□□□ 0.81
ACANP16112 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.14■□□□□ 0.81
ACANP16112 AL356740.2-201ENST00000601559 647 ntBASIC20.14■□□□□ 0.81
ACANP16112 AC106739.1-201ENST00000617035 715 ntBASIC20.14■□□□□ 0.81
ACANP16112 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ACANP16112 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ACANP16112 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.13■□□□□ 0.81
ACANP16112 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ACANP16112 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.12■□□□□ 0.81
ACANP16112 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACANP16112 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ACANP16112 ST7-AS1-201ENST00000456775 1889 ntBASIC20.12■□□□□ 0.81
ACANP16112 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ACANP16112 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ACANP16112 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.12■□□□□ 0.81
ACANP16112 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms