Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
COL11A2P13942 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
COL11A2P13942 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
COL11A2P13942 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
COL11A2P13942 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
COL11A2P13942 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
COL11A2P13942 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
COL11A2P13942 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
COL11A2P13942 AC131281.2-201ENST00000520478 145 ntBASIC30.33■■■□□ 2.45
COL11A2P13942 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.33■■■□□ 2.45
COL11A2P13942 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.33■■■□□ 2.45
COL11A2P13942 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
COL11A2P13942 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.33■■■□□ 2.45
COL11A2P13942 MIR638-201ENST00000385237 100 ntBASIC30.32■■■□□ 2.44
COL11A2P13942 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.31■■■□□ 2.44
COL11A2P13942 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.31■■■□□ 2.44
COL11A2P13942 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
COL11A2P13942 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
COL11A2P13942 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
COL11A2P13942 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
COL11A2P13942 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
COL11A2P13942 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.29■■■□□ 2.44
COL11A2P13942 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.29■■■□□ 2.44
COL11A2P13942 KRT125P-201ENST00000546827 989 ntBASIC30.28■■■□□ 2.44
COL11A2P13942 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
COL11A2P13942 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
COL11A2P13942 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.28■■■□□ 2.44
COL11A2P13942 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.27■■■□□ 2.44
COL11A2P13942 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
COL11A2P13942 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
COL11A2P13942 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
COL11A2P13942 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
COL11A2P13942 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
COL11A2P13942 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.25■■■□□ 2.43
COL11A2P13942 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
COL11A2P13942 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
COL11A2P13942 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
COL11A2P13942 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.23■■■□□ 2.43
COL11A2P13942 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
COL11A2P13942 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.23■■■□□ 2.43
COL11A2P13942 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
COL11A2P13942 AC022616.5-201ENST00000518796 181 ntBASIC30.22■■■□□ 2.43
COL11A2P13942 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
COL11A2P13942 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
COL11A2P13942 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.22■■■□□ 2.43
COL11A2P13942 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.22■■■□□ 2.43
COL11A2P13942 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
COL11A2P13942 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
COL11A2P13942 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.2■■■□□ 2.43
COL11A2P13942 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
COL11A2P13942 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
COL11A2P13942 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL11A2P13942 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.19■■■□□ 2.42
COL11A2P13942 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.19■■■□□ 2.42
COL11A2P13942 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL11A2P13942 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.19■■■□□ 2.42
COL11A2P13942 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.19■■■□□ 2.42
COL11A2P13942 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.19■■■□□ 2.42
COL11A2P13942 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL11A2P13942 TRIR-202ENST00000588213 841 ntTSL 3 BASIC30.18■■■□□ 2.42
COL11A2P13942 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL11A2P13942 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
COL11A2P13942 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
COL11A2P13942 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.17■■■□□ 2.42
COL11A2P13942 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
COL11A2P13942 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.17■■■□□ 2.42
COL11A2P13942 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
COL11A2P13942 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.16■■■□□ 2.42
COL11A2P13942 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.16■■■□□ 2.42
COL11A2P13942 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL11A2P13942 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL11A2P13942 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
COL11A2P13942 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL11A2P13942 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
COL11A2P13942 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
COL11A2P13942 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
COL11A2P13942 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
COL11A2P13942 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
COL11A2P13942 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
COL11A2P13942 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.15■■■□□ 2.42
COL11A2P13942 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC30.15■■■□□ 2.42
COL11A2P13942 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC30.14■■■□□ 2.42
COL11A2P13942 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.14■■■□□ 2.42
COL11A2P13942 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC30.14■■■□□ 2.42
COL11A2P13942 MIR4281-201ENST00000580852 62 ntBASIC30.14■■■□□ 2.42
COL11A2P13942 AC137630.3-201ENST00000607245 391 ntBASIC30.14■■■□□ 2.42
COL11A2P13942 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL11A2P13942 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL11A2P13942 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL11A2P13942 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
COL11A2P13942 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
COL11A2P13942 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.13■■■□□ 2.41
COL11A2P13942 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.12■■■□□ 2.41
COL11A2P13942 AC021242.3-201ENST00000607598 1377 ntBASIC30.12■■■□□ 2.41
COL11A2P13942 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL11A2P13942 KRT18P24-201ENST00000344739 1156 ntBASIC30.12■■■□□ 2.41
COL11A2P13942 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL11A2P13942 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.12■■■□□ 2.41
COL11A2P13942 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.11■■■□□ 2.41
COL11A2P13942 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms