Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SFTPBP07988 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SFTPBP07988 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SFTPBP07988 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.81■□□□□ 0.92
SFTPBP07988 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SFTPBP07988 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SFTPBP07988 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SFTPBP07988 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SFTPBP07988 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SFTPBP07988 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SFTPBP07988 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.8■□□□□ 0.92
SFTPBP07988 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SFTPBP07988 AC020928.2-201ENST00000588717 2197 ntBASIC20.8■□□□□ 0.92
SFTPBP07988 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SFTPBP07988 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SFTPBP07988 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SFTPBP07988 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
SFTPBP07988 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SFTPBP07988 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.79■□□□□ 0.92
SFTPBP07988 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SFTPBP07988 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SFTPBP07988 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.79■□□□□ 0.92
SFTPBP07988 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
SFTPBP07988 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SFTPBP07988 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
SFTPBP07988 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SFTPBP07988 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SFTPBP07988 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SFTPBP07988 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SFTPBP07988 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SFTPBP07988 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SFTPBP07988 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SFTPBP07988 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SFTPBP07988 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SFTPBP07988 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SFTPBP07988 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SFTPBP07988 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SFTPBP07988 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SFTPBP07988 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
SFTPBP07988 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SFTPBP07988 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.77■□□□□ 0.91
SFTPBP07988 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SFTPBP07988 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SFTPBP07988 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SFTPBP07988 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SFTPBP07988 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SFTPBP07988 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SFTPBP07988 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SFTPBP07988 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.75■□□□□ 0.91
SFTPBP07988 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.75■□□□□ 0.91
SFTPBP07988 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SFTPBP07988 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SFTPBP07988 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SFTPBP07988 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.75■□□□□ 0.91
SFTPBP07988 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SFTPBP07988 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SFTPBP07988 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SFTPBP07988 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SFTPBP07988 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.74■□□□□ 0.91
SFTPBP07988 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.74■□□□□ 0.91
SFTPBP07988 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SFTPBP07988 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SFTPBP07988 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SFTPBP07988 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SFTPBP07988 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SFTPBP07988 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.73■□□□□ 0.91
SFTPBP07988 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.73■□□□□ 0.91
SFTPBP07988 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SFTPBP07988 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SFTPBP07988 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SFTPBP07988 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.73■□□□□ 0.91
SFTPBP07988 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SFTPBP07988 ERN1-208ENST00000606895 2068 ntBASIC20.73■□□□□ 0.91
SFTPBP07988 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SFTPBP07988 AL359258.2-201ENST00000564063 1566 ntBASIC20.72■□□□□ 0.91
SFTPBP07988 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SFTPBP07988 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SFTPBP07988 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.72■□□□□ 0.91
SFTPBP07988 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.72■□□□□ 0.91
SFTPBP07988 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SFTPBP07988 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SFTPBP07988 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.71■□□□□ 0.91
SFTPBP07988 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SFTPBP07988 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SFTPBP07988 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.71■□□□□ 0.91
SFTPBP07988 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SFTPBP07988 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SFTPBP07988 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SFTPBP07988 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SFTPBP07988 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SFTPBP07988 GPX1-201ENST00000419349 1106 ntBASIC20.7■□□□□ 0.9
SFTPBP07988 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.7■□□□□ 0.9
SFTPBP07988 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SFTPBP07988 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.7■□□□□ 0.9
SFTPBP07988 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.7■□□□□ 0.9
SFTPBP07988 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SFTPBP07988 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.7■□□□□ 0.9
SFTPBP07988 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SFTPBP07988 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SFTPBP07988 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms