Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd74P04441 Gm27502-201ENSMUST00000183495 199 ntBASIC18.28■□□□□ 0.52
Cd74P04441 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd74P04441 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cd74P04441 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd74P04441 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd74P04441 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd74P04441 Gm14523-201ENSMUST00000117260 558 ntBASIC18.27■□□□□ 0.52
Cd74P04441 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.27■□□□□ 0.52
Cd74P04441 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.27■□□□□ 0.52
Cd74P04441 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cd74P04441 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cd74P04441 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.27■□□□□ 0.51
Cd74P04441 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cd74P04441 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd74P04441 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd74P04441 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd74P04441 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.26■□□□□ 0.51
Cd74P04441 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd74P04441 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd74P04441 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd74P04441 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd74P04441 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd74P04441 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cd74P04441 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd74P04441 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cd74P04441 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd74P04441 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd74P04441 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd74P04441 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Cd74P04441 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cd74P04441 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cd74P04441 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cd74P04441 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.24■□□□□ 0.51
Cd74P04441 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cd74P04441 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cd74P04441 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd74P04441 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.23■□□□□ 0.51
Cd74P04441 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd74P04441 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd74P04441 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cd74P04441 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.23■□□□□ 0.51
Cd74P04441 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Cd74P04441 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd74P04441 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd74P04441 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd74P04441 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd74P04441 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Cd74P04441 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cd74P04441 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cd74P04441 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cd74P04441 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Cd74P04441 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cd74P04441 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cd74P04441 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.21■□□□□ 0.51
Cd74P04441 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cd74P04441 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cd74P04441 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cd74P04441 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Cd74P04441 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cd74P04441 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cd74P04441 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cd74P04441 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.2■□□□□ 0.5
Cd74P04441 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd74P04441 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cd74P04441 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cd74P04441 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cd74P04441 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Cd74P04441 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd74P04441 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cd74P04441 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.18■□□□□ 0.5
Cd74P04441 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd74P04441 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.18■□□□□ 0.5
Cd74P04441 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.18■□□□□ 0.5
Cd74P04441 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cd74P04441 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd74P04441 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd74P04441 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cd74P04441 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cd74P04441 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cd74P04441 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cd74P04441 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.16■□□□□ 0.5
Cd74P04441 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.16■□□□□ 0.5
Cd74P04441 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.16■□□□□ 0.5
Cd74P04441 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd74P04441 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd74P04441 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd74P04441 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cd74P04441 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd74P04441 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.15■□□□□ 0.5
Cd74P04441 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.15■□□□□ 0.5
Cd74P04441 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd74P04441 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cd74P04441 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cd74P04441 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cd74P04441 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cd74P04441 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd74P04441 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd74P04441 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cd74P04441 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 131.9 ms