Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.32■□□□□ 0.84
SPDEFO95238 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SPDEFO95238 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SPDEFO95238 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.31■□□□□ 0.84
SPDEFO95238 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SPDEFO95238 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.3■□□□□ 0.84
SPDEFO95238 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.3■□□□□ 0.84
SPDEFO95238 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.3■□□□□ 0.84
SPDEFO95238 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.3■□□□□ 0.84
SPDEFO95238 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SPDEFO95238 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPDEFO95238 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.29■□□□□ 0.84
SPDEFO95238 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPDEFO95238 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SPDEFO95238 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SPDEFO95238 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPDEFO95238 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPDEFO95238 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.28■□□□□ 0.84
SPDEFO95238 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SPDEFO95238 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.27■□□□□ 0.84
SPDEFO95238 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SPDEFO95238 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPDEFO95238 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SPDEFO95238 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.27■□□□□ 0.83
SPDEFO95238 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SPDEFO95238 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDEFO95238 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPDEFO95238 LINC00543-201ENST00000567234 1845 ntBASIC20.26■□□□□ 0.83
SPDEFO95238 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SPDEFO95238 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SPDEFO95238 AC018358.1-201ENST00000631079 1402 ntBASIC20.26■□□□□ 0.83
SPDEFO95238 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SPDEFO95238 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDEFO95238 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SPDEFO95238 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDEFO95238 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDEFO95238 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDEFO95238 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SPDEFO95238 CLDN5-201ENST00000403084 2357 ntBASIC20.25■□□□□ 0.83
SPDEFO95238 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPDEFO95238 AC079834.2-201ENST00000609776 1949 ntBASIC20.25■□□□□ 0.83
SPDEFO95238 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDEFO95238 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDEFO95238 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.24■□□□□ 0.83
SPDEFO95238 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDEFO95238 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDEFO95238 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.24■□□□□ 0.83
SPDEFO95238 LINC01971-201ENST00000617888 1048 ntBASIC20.24■□□□□ 0.83
SPDEFO95238 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDEFO95238 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDEFO95238 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDEFO95238 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPDEFO95238 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDEFO95238 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDEFO95238 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDEFO95238 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDEFO95238 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.23■□□□□ 0.83
SPDEFO95238 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SPDEFO95238 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.23■□□□□ 0.83
SPDEFO95238 AC068473.5-201ENST00000616428 2072 ntBASIC20.23■□□□□ 0.83
SPDEFO95238 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.23■□□□□ 0.83
SPDEFO95238 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPDEFO95238 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDEFO95238 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDEFO95238 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPDEFO95238 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.22■□□□□ 0.83
SPDEFO95238 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
SPDEFO95238 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SPDEFO95238 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.22■□□□□ 0.83
SPDEFO95238 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.22■□□□□ 0.83
SPDEFO95238 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDEFO95238 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPDEFO95238 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.21■□□□□ 0.83
SPDEFO95238 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDEFO95238 AC142381.3-201ENST00000568208 1670 ntBASIC20.21■□□□□ 0.83
SPDEFO95238 AC110285.7-201ENST00000624417 1536 ntBASIC20.21■□□□□ 0.83
SPDEFO95238 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPDEFO95238 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDEFO95238 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.2■□□□□ 0.82
SPDEFO95238 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPDEFO95238 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SPDEFO95238 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPDEFO95238 AL139125.2-201ENST00000623134 1869 ntBASIC20.2■□□□□ 0.82
SPDEFO95238 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPDEFO95238 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.19■□□□□ 0.82
SPDEFO95238 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SPDEFO95238 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
SPDEFO95238 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SPDEFO95238 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDEFO95238 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.18■□□□□ 0.82
SPDEFO95238 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.18■□□□□ 0.82
SPDEFO95238 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.18■□□□□ 0.82
SPDEFO95238 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDEFO95238 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPDEFO95238 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDEFO95238 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDEFO95238 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPDEFO95238 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.17■□□□□ 0.82
SPDEFO95238 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPDEFO95238 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms