Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
ClppO88696 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ClppO88696 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ClppO88696 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ClppO88696 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.27■■□□□ 1
ClppO88696 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ClppO88696 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ClppO88696 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
ClppO88696 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.27■□□□□ 0.99
ClppO88696 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
ClppO88696 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ClppO88696 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.26■□□□□ 0.99
ClppO88696 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
ClppO88696 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.26■□□□□ 0.99
ClppO88696 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.26■□□□□ 0.99
ClppO88696 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
ClppO88696 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ClppO88696 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ClppO88696 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
ClppO88696 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ClppO88696 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ClppO88696 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ClppO88696 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ClppO88696 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ClppO88696 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ClppO88696 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ClppO88696 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ClppO88696 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.24■□□□□ 0.99
ClppO88696 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ClppO88696 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.23■□□□□ 0.99
ClppO88696 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ClppO88696 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.22■□□□□ 0.99
ClppO88696 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
ClppO88696 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ClppO88696 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ClppO88696 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ClppO88696 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ClppO88696 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ClppO88696 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ClppO88696 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ClppO88696 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ClppO88696 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ClppO88696 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ClppO88696 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ClppO88696 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClppO88696 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ClppO88696 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.18■□□□□ 0.98
ClppO88696 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClppO88696 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClppO88696 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClppO88696 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClppO88696 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ClppO88696 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClppO88696 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClppO88696 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ClppO88696 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClppO88696 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClppO88696 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.17■□□□□ 0.98
ClppO88696 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ClppO88696 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClppO88696 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ClppO88696 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ClppO88696 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ClppO88696 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ClppO88696 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ClppO88696 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ClppO88696 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ClppO88696 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ClppO88696 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ClppO88696 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ClppO88696 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ClppO88696 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ClppO88696 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ClppO88696 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ClppO88696 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.14■□□□□ 0.97
ClppO88696 Gm43566-201ENSMUST00000196851 808 ntBASIC21.14■□□□□ 0.97
ClppO88696 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ClppO88696 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
ClppO88696 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ClppO88696 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClppO88696 Gm15546-201ENSMUST00000122095 826 ntBASIC21.13■□□□□ 0.97
ClppO88696 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.13■□□□□ 0.97
ClppO88696 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClppO88696 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ClppO88696 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClppO88696 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ClppO88696 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ClppO88696 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClppO88696 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ClppO88696 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
ClppO88696 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClppO88696 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.12■□□□□ 0.97
ClppO88696 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
ClppO88696 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClppO88696 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ClppO88696 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ClppO88696 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ClppO88696 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ClppO88696 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ClppO88696 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms