Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Becn1O88597 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Becn1O88597 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Becn1O88597 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Becn1O88597 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Becn1O88597 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
Becn1O88597 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Becn1O88597 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Becn1O88597 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Becn1O88597 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Becn1O88597 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Becn1O88597 Gm8503-201ENSMUST00000118131 455 ntBASIC24.95■■□□□ 1.58
Becn1O88597 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.95■■□□□ 1.58
Becn1O88597 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
Becn1O88597 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Becn1O88597 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Becn1O88597 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Becn1O88597 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Becn1O88597 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Becn1O88597 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Becn1O88597 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Becn1O88597 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Becn1O88597 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Becn1O88597 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Becn1O88597 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Becn1O88597 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Becn1O88597 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Becn1O88597 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Becn1O88597 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.92■■□□□ 1.58
Becn1O88597 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Becn1O88597 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Becn1O88597 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Becn1O88597 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.91■■□□□ 1.58
Becn1O88597 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Becn1O88597 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Becn1O88597 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Becn1O88597 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
Becn1O88597 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Becn1O88597 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Becn1O88597 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Becn1O88597 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
Becn1O88597 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
Becn1O88597 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
Becn1O88597 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.89■■□□□ 1.57
Becn1O88597 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Becn1O88597 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.88■■□□□ 1.57
Becn1O88597 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Becn1O88597 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.87■■□□□ 1.57
Becn1O88597 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Becn1O88597 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Becn1O88597 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Becn1O88597 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Becn1O88597 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Becn1O88597 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Becn1O88597 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Becn1O88597 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.85■■□□□ 1.57
Becn1O88597 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Becn1O88597 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.84■■□□□ 1.57
Becn1O88597 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Becn1O88597 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.84■■□□□ 1.57
Becn1O88597 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Becn1O88597 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Becn1O88597 Hsf1-207ENSMUST00000228371 2102 ntBASIC24.83■■□□□ 1.57
Becn1O88597 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Becn1O88597 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Becn1O88597 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Becn1O88597 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.56
Becn1O88597 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Becn1O88597 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Becn1O88597 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.82■■□□□ 1.56
Becn1O88597 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Becn1O88597 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Becn1O88597 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Becn1O88597 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Becn1O88597 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Becn1O88597 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Becn1O88597 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Becn1O88597 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Becn1O88597 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Becn1O88597 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Becn1O88597 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.79■■□□□ 1.56
Becn1O88597 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Becn1O88597 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
Becn1O88597 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Becn1O88597 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Becn1O88597 Gm30023-201ENSMUST00000197970 889 ntBASIC24.78■■□□□ 1.56
Becn1O88597 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Becn1O88597 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Becn1O88597 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.77■■□□□ 1.56
Becn1O88597 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Becn1O88597 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Becn1O88597 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Becn1O88597 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Becn1O88597 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Becn1O88597 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Becn1O88597 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Becn1O88597 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
Becn1O88597 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Becn1O88597 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Becn1O88597 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms