Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cops4O88544 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cops4O88544 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Cops4O88544 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Cops4O88544 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.17■□□□□ 0.82
Cops4O88544 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cops4O88544 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cops4O88544 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Cops4O88544 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Cops4O88544 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops4O88544 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops4O88544 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cops4O88544 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.15■□□□□ 0.82
Cops4O88544 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops4O88544 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops4O88544 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops4O88544 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cops4O88544 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cops4O88544 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.14■□□□□ 0.81
Cops4O88544 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cops4O88544 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cops4O88544 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cops4O88544 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cops4O88544 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cops4O88544 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cops4O88544 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cops4O88544 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cops4O88544 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cops4O88544 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cops4O88544 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Cops4O88544 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cops4O88544 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cops4O88544 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cops4O88544 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cops4O88544 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cops4O88544 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cops4O88544 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cops4O88544 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cops4O88544 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cops4O88544 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.11■□□□□ 0.81
Cops4O88544 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cops4O88544 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cops4O88544 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cops4O88544 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cops4O88544 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cops4O88544 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cops4O88544 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cops4O88544 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cops4O88544 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cops4O88544 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cops4O88544 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cops4O88544 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cops4O88544 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cops4O88544 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cops4O88544 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cops4O88544 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cops4O88544 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cops4O88544 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cops4O88544 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cops4O88544 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cops4O88544 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.06■□□□□ 0.8
Cops4O88544 Gm37136-201ENSMUST00000194368 194 ntBASIC20.06■□□□□ 0.8
Cops4O88544 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cops4O88544 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cops4O88544 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cops4O88544 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cops4O88544 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cops4O88544 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cops4O88544 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cops4O88544 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
Cops4O88544 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cops4O88544 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cops4O88544 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cops4O88544 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cops4O88544 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cops4O88544 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cops4O88544 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cops4O88544 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cops4O88544 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cops4O88544 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cops4O88544 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cops4O88544 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cops4O88544 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cops4O88544 Gm8503-201ENSMUST00000118131 455 ntBASIC20.03■□□□□ 0.8
Cops4O88544 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.03■□□□□ 0.8
Cops4O88544 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cops4O88544 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cops4O88544 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cops4O88544 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
Cops4O88544 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cops4O88544 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.02■□□□□ 0.8
Cops4O88544 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Cops4O88544 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cops4O88544 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Cops4O88544 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cops4O88544 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cops4O88544 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cops4O88544 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cops4O88544 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cops4O88544 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms