Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops3O88543 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Cops3O88543 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cops3O88543 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops3O88543 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.54■□□□□ 0.72
Cops3O88543 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cops3O88543 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.54■□□□□ 0.72
Cops3O88543 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cops3O88543 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.54■□□□□ 0.72
Cops3O88543 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.54■□□□□ 0.72
Cops3O88543 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cops3O88543 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops3O88543 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cops3O88543 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cops3O88543 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Cops3O88543 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cops3O88543 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cops3O88543 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.53■□□□□ 0.72
Cops3O88543 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cops3O88543 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.53■□□□□ 0.72
Cops3O88543 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Cops3O88543 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cops3O88543 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cops3O88543 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cops3O88543 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops3O88543 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops3O88543 Mir3960-201ENSMUST00000198213 73 ntBASIC19.51■□□□□ 0.71
Cops3O88543 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.51■□□□□ 0.71
Cops3O88543 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops3O88543 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops3O88543 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cops3O88543 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.5■□□□□ 0.71
Cops3O88543 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Cops3O88543 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cops3O88543 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cops3O88543 Gm45364-201ENSMUST00000210883 159 ntBASIC19.5■□□□□ 0.71
Cops3O88543 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.5■□□□□ 0.71
Cops3O88543 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cops3O88543 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cops3O88543 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cops3O88543 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cops3O88543 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cops3O88543 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.5■□□□□ 0.71
Cops3O88543 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cops3O88543 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cops3O88543 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cops3O88543 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cops3O88543 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cops3O88543 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Cops3O88543 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cops3O88543 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cops3O88543 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cops3O88543 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cops3O88543 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cops3O88543 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cops3O88543 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cops3O88543 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cops3O88543 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.47■□□□□ 0.71
Cops3O88543 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cops3O88543 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cops3O88543 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cops3O88543 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cops3O88543 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cops3O88543 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cops3O88543 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops3O88543 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cops3O88543 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cops3O88543 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cops3O88543 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops3O88543 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops3O88543 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.46■□□□□ 0.71
Cops3O88543 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops3O88543 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops3O88543 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops3O88543 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cops3O88543 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cops3O88543 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cops3O88543 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cops3O88543 Terc-201ENSMUST00000082862 423 ntBASIC19.45■□□□□ 0.7
Cops3O88543 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cops3O88543 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops3O88543 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops3O88543 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cops3O88543 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.44■□□□□ 0.7
Cops3O88543 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.44■□□□□ 0.7
Cops3O88543 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops3O88543 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cops3O88543 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.43■□□□□ 0.7
Cops3O88543 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.43■□□□□ 0.7
Cops3O88543 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops3O88543 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops3O88543 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cops3O88543 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.43■□□□□ 0.7
Cops3O88543 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops3O88543 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops3O88543 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops3O88543 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops3O88543 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cops3O88543 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cops3O88543 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms