Protein–RNA interactions for Protein: O75096

LRP4, Low-density lipoprotein receptor-related protein 4, humanhuman

Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4O75096 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LRP4O75096 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.81■■□□□ 1.4
LRP4O75096 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.8■■□□□ 1.4
LRP4O75096 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRP4O75096 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRP4O75096 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRP4O75096 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRP4O75096 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.79■■□□□ 1.4
LRP4O75096 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRP4O75096 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRP4O75096 AC009299.2-201ENST00000482477 511 ntBASIC23.78■■□□□ 1.4
LRP4O75096 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.78■■□□□ 1.4
LRP4O75096 KRT8P33-201ENST00000508125 1423 ntBASIC23.78■■□□□ 1.4
LRP4O75096 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRP4O75096 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRP4O75096 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRP4O75096 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRP4O75096 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRP4O75096 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRP4O75096 AP004609.3-201ENST00000610705 1884 ntBASIC23.78■■□□□ 1.4
LRP4O75096 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRP4O75096 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
LRP4O75096 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
LRP4O75096 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRP4O75096 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.76■■□□□ 1.39
LRP4O75096 AC087393.1-201ENST00000582896 145 ntBASIC23.76■■□□□ 1.39
LRP4O75096 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.76■■□□□ 1.39
LRP4O75096 AC074183.2-201ENST00000623112 922 ntBASIC23.76■■□□□ 1.39
LRP4O75096 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
LRP4O75096 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRP4O75096 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.76■■□□□ 1.39
LRP4O75096 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRP4O75096 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LRP4O75096 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.75■■□□□ 1.39
LRP4O75096 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRP4O75096 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.75■■□□□ 1.39
LRP4O75096 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LRP4O75096 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.75■■□□□ 1.39
LRP4O75096 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.74■■□□□ 1.39
LRP4O75096 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.73■■□□□ 1.39
LRP4O75096 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.72■■□□□ 1.39
LRP4O75096 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRP4O75096 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRP4O75096 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRP4O75096 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRP4O75096 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.72■■□□□ 1.39
LRP4O75096 RPS2P7-201ENST00000447334 885 ntBASIC23.72■■□□□ 1.39
LRP4O75096 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LRP4O75096 AC103834.1-201ENST00000520383 144 ntBASIC23.72■■□□□ 1.39
LRP4O75096 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRP4O75096 BHLHE23-202ENST00000612929 1109 ntBASIC23.72■■□□□ 1.39
LRP4O75096 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LRP4O75096 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
LRP4O75096 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRP4O75096 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRP4O75096 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRP4O75096 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.71■■□□□ 1.39
LRP4O75096 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRP4O75096 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRP4O75096 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRP4O75096 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRP4O75096 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.71■■□□□ 1.39
LRP4O75096 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRP4O75096 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRP4O75096 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
LRP4O75096 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRP4O75096 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.7■■□□□ 1.38
LRP4O75096 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
LRP4O75096 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRP4O75096 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
LRP4O75096 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRP4O75096 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
LRP4O75096 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRP4O75096 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
LRP4O75096 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRP4O75096 AC018755.3-202ENST00000596210 929 ntBASIC23.69■■□□□ 1.38
LRP4O75096 AL035685.1-201ENST00000636663 812 ntBASIC23.69■■□□□ 1.38
LRP4O75096 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRP4O75096 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LRP4O75096 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.67■■□□□ 1.38
LRP4O75096 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LRP4O75096 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.67■■□□□ 1.38
LRP4O75096 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LRP4O75096 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.67■■□□□ 1.38
LRP4O75096 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRP4O75096 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LRP4O75096 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRP4O75096 AC019171.1-201ENST00000601251 1056 ntBASIC23.66■■□□□ 1.38
LRP4O75096 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRP4O75096 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRP4O75096 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.65■■□□□ 1.38
LRP4O75096 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRP4O75096 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.65■■□□□ 1.38
LRP4O75096 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRP4O75096 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRP4O75096 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRP4O75096 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.65■■□□□ 1.38
LRP4O75096 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LRP4O75096 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LRP4O75096 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms