Protein–RNA interactions for Protein: O55112

Aff2, AF4/FMR2 family member 2, mousemouse

Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aff2O55112 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Aff2O55112 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Aff2O55112 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Aff2O55112 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Aff2O55112 Gm27502-201ENSMUST00000183495 199 ntBASIC21.1■□□□□ 0.97
Aff2O55112 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Aff2O55112 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Aff2O55112 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Aff2O55112 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.08■□□□□ 0.97
Aff2O55112 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.08■□□□□ 0.97
Aff2O55112 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.08■□□□□ 0.97
Aff2O55112 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Aff2O55112 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.08■□□□□ 0.97
Aff2O55112 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Aff2O55112 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Aff2O55112 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Aff2O55112 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Aff2O55112 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Aff2O55112 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Aff2O55112 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Aff2O55112 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Aff2O55112 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.06■□□□□ 0.96
Aff2O55112 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Aff2O55112 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.06■□□□□ 0.96
Aff2O55112 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Aff2O55112 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Aff2O55112 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Aff2O55112 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Aff2O55112 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Aff2O55112 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Aff2O55112 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Aff2O55112 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Aff2O55112 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Aff2O55112 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Aff2O55112 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Aff2O55112 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Aff2O55112 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Aff2O55112 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Aff2O55112 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Aff2O55112 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Aff2O55112 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Aff2O55112 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Aff2O55112 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.02■□□□□ 0.96
Aff2O55112 Gm12366-201ENSMUST00000121722 873 ntBASIC21.02■□□□□ 0.96
Aff2O55112 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.02■□□□□ 0.96
Aff2O55112 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Aff2O55112 Gm44428-201ENSMUST00000204474 874 ntBASIC21.02■□□□□ 0.96
Aff2O55112 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.02■□□□□ 0.96
Aff2O55112 Gm5786-201ENSMUST00000085368 882 ntBASIC21.02■□□□□ 0.96
Aff2O55112 Cap2-205ENSMUST00000225824 1634 ntBASIC21.02■□□□□ 0.96
Aff2O55112 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Aff2O55112 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.01■□□□□ 0.95
Aff2O55112 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Aff2O55112 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.01■□□□□ 0.95
Aff2O55112 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Aff2O55112 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Aff2O55112 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Aff2O55112 Gm42699-201ENSMUST00000198104 1657 ntBASIC21■□□□□ 0.95
Aff2O55112 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21■□□□□ 0.95
Aff2O55112 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Aff2O55112 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Aff2O55112 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Aff2O55112 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Aff2O55112 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Aff2O55112 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Aff2O55112 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Aff2O55112 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Aff2O55112 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Aff2O55112 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.99■□□□□ 0.95
Aff2O55112 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Aff2O55112 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.99■□□□□ 0.95
Aff2O55112 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Aff2O55112 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.99■□□□□ 0.95
Aff2O55112 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Aff2O55112 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Aff2O55112 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.98■□□□□ 0.95
Aff2O55112 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.98■□□□□ 0.95
Aff2O55112 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Aff2O55112 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Aff2O55112 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Aff2O55112 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Aff2O55112 Gm14523-201ENSMUST00000117260 558 ntBASIC20.97■□□□□ 0.95
Aff2O55112 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.97■□□□□ 0.95
Aff2O55112 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Aff2O55112 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.97■□□□□ 0.95
Aff2O55112 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Aff2O55112 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Aff2O55112 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Aff2O55112 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Aff2O55112 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Aff2O55112 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.96■□□□□ 0.95
Aff2O55112 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Aff2O55112 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Aff2O55112 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Aff2O55112 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Aff2O55112 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.95■□□□□ 0.94
Aff2O55112 Gm7332-201ENSMUST00000118351 454 ntBASIC20.95■□□□□ 0.94
Aff2O55112 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Aff2O55112 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Aff2O55112 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms