Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SncaO55042 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SncaO55042 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SncaO55042 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SncaO55042 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SncaO55042 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SncaO55042 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SncaO55042 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SncaO55042 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.04■□□□□ 0.48
SncaO55042 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.04■□□□□ 0.48
SncaO55042 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaO55042 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
SncaO55042 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaO55042 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
SncaO55042 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaO55042 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaO55042 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaO55042 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SncaO55042 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SncaO55042 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.02■□□□□ 0.48
SncaO55042 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaO55042 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaO55042 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SncaO55042 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SncaO55042 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.02■□□□□ 0.48
SncaO55042 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.02■□□□□ 0.48
SncaO55042 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SncaO55042 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.02■□□□□ 0.47
SncaO55042 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SncaO55042 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
SncaO55042 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SncaO55042 Mir3960-201ENSMUST00000198213 73 ntBASIC18.01■□□□□ 0.47
SncaO55042 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.01■□□□□ 0.47
SncaO55042 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaO55042 Gm9812-201ENSMUST00000061934 968 ntBASIC18.01■□□□□ 0.47
SncaO55042 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SncaO55042 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaO55042 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaO55042 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SncaO55042 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SncaO55042 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SncaO55042 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SncaO55042 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SncaO55042 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
SncaO55042 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SncaO55042 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18■□□□□ 0.47
SncaO55042 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18■□□□□ 0.47
SncaO55042 Gm7432-201ENSMUST00000210343 879 ntBASIC18■□□□□ 0.47
SncaO55042 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SncaO55042 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SncaO55042 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SncaO55042 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
SncaO55042 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SncaO55042 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.99■□□□□ 0.47
SncaO55042 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SncaO55042 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SncaO55042 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.99■□□□□ 0.47
SncaO55042 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SncaO55042 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SncaO55042 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SncaO55042 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.99■□□□□ 0.47
SncaO55042 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SncaO55042 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SncaO55042 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SncaO55042 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SncaO55042 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SncaO55042 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SncaO55042 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SncaO55042 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.98■□□□□ 0.47
SncaO55042 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.98■□□□□ 0.47
SncaO55042 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.97■□□□□ 0.47
SncaO55042 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SncaO55042 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SncaO55042 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.97■□□□□ 0.47
SncaO55042 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
SncaO55042 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SncaO55042 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SncaO55042 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
SncaO55042 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SncaO55042 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SncaO55042 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SncaO55042 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SncaO55042 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.96■□□□□ 0.47
SncaO55042 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.96■□□□□ 0.47
SncaO55042 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SncaO55042 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SncaO55042 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SncaO55042 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SncaO55042 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
SncaO55042 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.96■□□□□ 0.46
SncaO55042 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SncaO55042 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SncaO55042 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SncaO55042 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SncaO55042 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SncaO55042 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SncaO55042 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SncaO55042 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.94■□□□□ 0.46
SncaO55042 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SncaO55042 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms