Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TNRC18O15417 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC27.32■■□□□ 1.96
TNRC18O15417 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
TNRC18O15417 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.32■■□□□ 1.96
TNRC18O15417 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TNRC18O15417 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.31■■□□□ 1.96
TNRC18O15417 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC27.31■■□□□ 1.96
TNRC18O15417 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
TNRC18O15417 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TNRC18O15417 RPS2P7-201ENST00000447334 885 ntBASIC27.3■■□□□ 1.96
TNRC18O15417 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
TNRC18O15417 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC27.3■■□□□ 1.96
TNRC18O15417 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TNRC18O15417 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.3■■□□□ 1.96
TNRC18O15417 HYI-206ENST00000372434 1025 ntTSL 5 BASIC27.3■■□□□ 1.96
TNRC18O15417 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
TNRC18O15417 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.3■■□□□ 1.96
TNRC18O15417 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
TNRC18O15417 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TNRC18O15417 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC27.29■■□□□ 1.96
TNRC18O15417 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TNRC18O15417 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TNRC18O15417 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TNRC18O15417 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
TNRC18O15417 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
TNRC18O15417 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TNRC18O15417 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TNRC18O15417 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TNRC18O15417 IKBKGP1-201ENST00000612193 1073 ntBASIC27.27■■□□□ 1.96
TNRC18O15417 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
TNRC18O15417 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TNRC18O15417 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TNRC18O15417 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
TNRC18O15417 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TNRC18O15417 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
TNRC18O15417 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.27■■□□□ 1.96
TNRC18O15417 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TNRC18O15417 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC27.26■■□□□ 1.95
TNRC18O15417 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
TNRC18O15417 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TNRC18O15417 KRT18P24-201ENST00000344739 1156 ntBASIC27.25■■□□□ 1.95
TNRC18O15417 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC27.24■■□□□ 1.95
TNRC18O15417 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TNRC18O15417 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.23■■□□□ 1.95
TNRC18O15417 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
TNRC18O15417 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TNRC18O15417 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
TNRC18O15417 AL355001.2-201ENST00000620617 1191 ntBASIC27.23■■□□□ 1.95
TNRC18O15417 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
TNRC18O15417 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC27.22■■□□□ 1.95
TNRC18O15417 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TNRC18O15417 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TNRC18O15417 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TNRC18O15417 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC27.21■■□□□ 1.95
TNRC18O15417 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
TNRC18O15417 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC27.21■■□□□ 1.95
TNRC18O15417 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.21■■□□□ 1.95
TNRC18O15417 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC27.2■■□□□ 1.95
TNRC18O15417 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.2■■□□□ 1.94
TNRC18O15417 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.2■■□□□ 1.94
TNRC18O15417 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TNRC18O15417 AC010997.5-201ENST00000609182 354 ntBASIC27.2■■□□□ 1.94
TNRC18O15417 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC27.19■■□□□ 1.94
TNRC18O15417 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TNRC18O15417 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC27.19■■□□□ 1.94
TNRC18O15417 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TNRC18O15417 AL136967.2-201ENST00000623968 743 ntBASIC27.19■■□□□ 1.94
TNRC18O15417 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC27.18■■□□□ 1.94
TNRC18O15417 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
TNRC18O15417 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TNRC18O15417 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
TNRC18O15417 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.18■■□□□ 1.94
TNRC18O15417 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
TNRC18O15417 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TNRC18O15417 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
TNRC18O15417 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC27.16■■□□□ 1.94
TNRC18O15417 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
TNRC18O15417 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.16■■□□□ 1.94
TNRC18O15417 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.16■■□□□ 1.94
TNRC18O15417 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TNRC18O15417 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
TNRC18O15417 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TNRC18O15417 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.16■■□□□ 1.94
TNRC18O15417 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
TNRC18O15417 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TNRC18O15417 AL356740.2-201ENST00000601559 647 ntBASIC27.15■■□□□ 1.94
TNRC18O15417 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TNRC18O15417 UNC93B3-201ENST00000308076 687 ntBASIC27.15■■□□□ 1.94
TNRC18O15417 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TNRC18O15417 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
TNRC18O15417 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.15■■□□□ 1.94
TNRC18O15417 EDA-201ENST00000338901 1233 ntBASIC27.14■■□□□ 1.94
TNRC18O15417 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
TNRC18O15417 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC27.14■■□□□ 1.93
TNRC18O15417 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
TNRC18O15417 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.13■■□□□ 1.93
TNRC18O15417 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC27.13■■□□□ 1.93
TNRC18O15417 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC27.13■■□□□ 1.93
TNRC18O15417 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TNRC18O15417 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms