Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SYN3O14994 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SYN3O14994 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SYN3O14994 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
SYN3O14994 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.85■■□□□ 1.73
SYN3O14994 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SYN3O14994 YBX1P4-201ENST00000392794 808 ntBASIC25.85■■□□□ 1.73
SYN3O14994 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC25.85■■□□□ 1.73
SYN3O14994 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SYN3O14994 RPS2P7-201ENST00000447334 885 ntBASIC25.85■■□□□ 1.73
SYN3O14994 AC103834.1-201ENST00000520383 144 ntBASIC25.85■■□□□ 1.73
SYN3O14994 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.85■■□□□ 1.73
SYN3O14994 AC019171.1-201ENST00000601251 1056 ntBASIC25.85■■□□□ 1.73
SYN3O14994 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SYN3O14994 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
SYN3O14994 KRT8P33-201ENST00000508125 1423 ntBASIC25.85■■□□□ 1.73
SYN3O14994 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SYN3O14994 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.84■■□□□ 1.73
SYN3O14994 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SYN3O14994 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SYN3O14994 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC25.84■■□□□ 1.73
SYN3O14994 MIR4508-201ENST00000584178 70 ntBASIC25.84■■□□□ 1.73
SYN3O14994 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.84■■□□□ 1.73
SYN3O14994 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.83■■□□□ 1.73
SYN3O14994 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
SYN3O14994 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
SYN3O14994 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SYN3O14994 AL451085.2-201ENST00000605085 799 ntBASIC25.82■■□□□ 1.72
SYN3O14994 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SYN3O14994 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SYN3O14994 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SYN3O14994 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SYN3O14994 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SYN3O14994 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.8■■□□□ 1.72
SYN3O14994 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SYN3O14994 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SYN3O14994 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SYN3O14994 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.8■■□□□ 1.72
SYN3O14994 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.8■■□□□ 1.72
SYN3O14994 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.79■■□□□ 1.72
SYN3O14994 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
SYN3O14994 AL035685.1-201ENST00000636663 812 ntBASIC25.79■■□□□ 1.72
SYN3O14994 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.78■■□□□ 1.72
SYN3O14994 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SYN3O14994 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SYN3O14994 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
SYN3O14994 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
SYN3O14994 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
SYN3O14994 LONRF2P2-201ENST00000439212 571 ntBASIC25.77■■□□□ 1.72
SYN3O14994 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SYN3O14994 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
SYN3O14994 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SYN3O14994 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.75■■□□□ 1.71
SYN3O14994 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SYN3O14994 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SYN3O14994 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.75■■□□□ 1.71
SYN3O14994 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
SYN3O14994 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SYN3O14994 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
SYN3O14994 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SYN3O14994 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
SYN3O14994 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SYN3O14994 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SYN3O14994 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SYN3O14994 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
SYN3O14994 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SYN3O14994 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.72■■□□□ 1.71
SYN3O14994 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.72■■□□□ 1.71
SYN3O14994 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SYN3O14994 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SYN3O14994 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SYN3O14994 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SYN3O14994 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
SYN3O14994 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC25.71■■□□□ 1.71
SYN3O14994 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
SYN3O14994 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.71■■□□□ 1.71
SYN3O14994 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
SYN3O14994 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
SYN3O14994 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SYN3O14994 AC103724.3-201ENST00000564481 992 ntBASIC25.7■■□□□ 1.7
SYN3O14994 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SYN3O14994 AC009299.2-201ENST00000482477 511 ntBASIC25.69■■□□□ 1.7
SYN3O14994 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SYN3O14994 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SYN3O14994 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SYN3O14994 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
SYN3O14994 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC25.69■■□□□ 1.7
SYN3O14994 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SYN3O14994 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.68■■□□□ 1.7
SYN3O14994 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SYN3O14994 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.68■■□□□ 1.7
SYN3O14994 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SYN3O14994 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC25.68■■□□□ 1.7
SYN3O14994 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SYN3O14994 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
SYN3O14994 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SYN3O14994 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SYN3O14994 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SYN3O14994 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SYN3O14994 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms