Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC010980.1-201ENST00000587192 1142 ntBASIC22.02■■□□□ 1.12
NPIPA3F8WFD2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
NPIPA3F8WFD2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NPIPA3F8WFD2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.01■■□□□ 1.11
NPIPA3F8WFD2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
NPIPA3F8WFD2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.01■■□□□ 1.11
NPIPA3F8WFD2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NPIPA3F8WFD2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.01■■□□□ 1.11
NPIPA3F8WFD2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.01■■□□□ 1.11
NPIPA3F8WFD2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPIPA3F8WFD2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPIPA3F8WFD2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPIPA3F8WFD2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
NPIPA3F8WFD2 AP004609.3-201ENST00000610705 1884 ntBASIC22■■□□□ 1.11
NPIPA3F8WFD2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
NPIPA3F8WFD2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPA3F8WFD2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.99■■□□□ 1.11
NPIPA3F8WFD2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPA3F8WFD2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPA3F8WFD2 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.99■■□□□ 1.11
NPIPA3F8WFD2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.99■■□□□ 1.11
NPIPA3F8WFD2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.99■■□□□ 1.11
NPIPA3F8WFD2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPA3F8WFD2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPA3F8WFD2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NPIPA3F8WFD2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.98■■□□□ 1.11
NPIPA3F8WFD2 AC074183.2-201ENST00000623112 922 ntBASIC21.98■■□□□ 1.11
NPIPA3F8WFD2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NPIPA3F8WFD2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.97■■□□□ 1.11
NPIPA3F8WFD2 KRT8P33-201ENST00000508125 1423 ntBASIC21.97■■□□□ 1.11
NPIPA3F8WFD2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPIPA3F8WFD2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPIPA3F8WFD2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPIPA3F8WFD2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPIPA3F8WFD2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.96■■□□□ 1.11
NPIPA3F8WFD2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
NPIPA3F8WFD2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.96■■□□□ 1.11
NPIPA3F8WFD2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.95■■□□□ 1.11
NPIPA3F8WFD2 AC142472.1-201ENST00000612013 1741 ntBASIC21.95■■□□□ 1.1
NPIPA3F8WFD2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
NPIPA3F8WFD2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.95■■□□□ 1.1
NPIPA3F8WFD2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.95■■□□□ 1.1
NPIPA3F8WFD2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.95■■□□□ 1.1
NPIPA3F8WFD2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NPIPA3F8WFD2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA3F8WFD2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA3F8WFD2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
NPIPA3F8WFD2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA3F8WFD2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.94■■□□□ 1.1
NPIPA3F8WFD2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.94■■□□□ 1.1
NPIPA3F8WFD2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.94■■□□□ 1.1
NPIPA3F8WFD2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA3F8WFD2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.94■■□□□ 1.1
NPIPA3F8WFD2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA3F8WFD2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA3F8WFD2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPA3F8WFD2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.93■■□□□ 1.1
NPIPA3F8WFD2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.93■■□□□ 1.1
NPIPA3F8WFD2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPA3F8WFD2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA3F8WFD2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.92■■□□□ 1.1
NPIPA3F8WFD2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
NPIPA3F8WFD2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA3F8WFD2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA3F8WFD2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA3F8WFD2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA3F8WFD2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
NPIPA3F8WFD2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
NPIPA3F8WFD2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.91■■□□□ 1.1
NPIPA3F8WFD2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPIPA3F8WFD2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.91■■□□□ 1.1
NPIPA3F8WFD2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPIPA3F8WFD2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
NPIPA3F8WFD2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.9■■□□□ 1.1
NPIPA3F8WFD2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA3F8WFD2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA3F8WFD2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA3F8WFD2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA3F8WFD2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
NPIPA3F8WFD2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NPIPA3F8WFD2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NPIPA3F8WFD2 YBX1P4-201ENST00000392794 808 ntBASIC21.89■■□□□ 1.09
NPIPA3F8WFD2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.89■■□□□ 1.09
NPIPA3F8WFD2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NPIPA3F8WFD2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.89■■□□□ 1.09
NPIPA3F8WFD2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA3F8WFD2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA3F8WFD2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA3F8WFD2 AL451085.2-201ENST00000605085 799 ntBASIC21.88■■□□□ 1.09
NPIPA3F8WFD2 PVT1_1.1-201ENST00000615125 194 ntBASIC21.88■■□□□ 1.09
NPIPA3F8WFD2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA3F8WFD2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA3F8WFD2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
NPIPA3F8WFD2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPIPA3F8WFD2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.87■■□□□ 1.09
NPIPA3F8WFD2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
NPIPA3F8WFD2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NPIPA3F8WFD2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
NPIPA3F8WFD2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.86■■□□□ 1.09
NPIPA3F8WFD2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms