Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Chd2E9PZM4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Chd2E9PZM4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Chd2E9PZM4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Chd2E9PZM4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Chd2E9PZM4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC31.46■■■□□ 2.63
Chd2E9PZM4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC31.46■■■□□ 2.63
Chd2E9PZM4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC31.45■■■□□ 2.63
Chd2E9PZM4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Chd2E9PZM4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Chd2E9PZM4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Chd2E9PZM4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Chd2E9PZM4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Chd2E9PZM4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Chd2E9PZM4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC31.42■■■□□ 2.62
Chd2E9PZM4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
Chd2E9PZM4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Chd2E9PZM4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC31.42■■■□□ 2.62
Chd2E9PZM4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Chd2E9PZM4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC31.42■■■□□ 2.62
Chd2E9PZM4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Chd2E9PZM4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC31.41■■■□□ 2.62
Chd2E9PZM4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Chd2E9PZM4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Chd2E9PZM4 Gm40881-201ENSMUST00000223397 166 ntBASIC31.4■■■□□ 2.62
Chd2E9PZM4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC31.4■■■□□ 2.62
Chd2E9PZM4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
Chd2E9PZM4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Chd2E9PZM4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
Chd2E9PZM4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC31.39■■■□□ 2.62
Chd2E9PZM4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC31.38■■■□□ 2.61
Chd2E9PZM4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Chd2E9PZM4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Chd2E9PZM4 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Chd2E9PZM4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Chd2E9PZM4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Chd2E9PZM4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Chd2E9PZM4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC31.36■■■□□ 2.61
Chd2E9PZM4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Chd2E9PZM4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Chd2E9PZM4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Chd2E9PZM4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Chd2E9PZM4 Gm28536-201ENSMUST00000190971 1317 ntBASIC31.35■■■□□ 2.61
Chd2E9PZM4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Chd2E9PZM4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC31.35■■■□□ 2.61
Chd2E9PZM4 Gm27454-201ENSMUST00000185090 204 ntBASIC31.35■■■□□ 2.61
Chd2E9PZM4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Chd2E9PZM4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
Chd2E9PZM4 Amer2-203ENSMUST00000225247 2662 ntBASIC31.34■■■□□ 2.61
Chd2E9PZM4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Chd2E9PZM4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Chd2E9PZM4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC31.34■■■□□ 2.61
Chd2E9PZM4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC31.33■■■□□ 2.61
Chd2E9PZM4 Nsd1-206ENSMUST00000224918 1001 ntBASIC31.33■■■□□ 2.61
Chd2E9PZM4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
Chd2E9PZM4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Chd2E9PZM4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Chd2E9PZM4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Chd2E9PZM4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC31.32■■■□□ 2.6
Chd2E9PZM4 Appbp2os-202ENSMUST00000206972 447 ntBASIC31.32■■■□□ 2.6
Chd2E9PZM4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Chd2E9PZM4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Chd2E9PZM4 Gm5297-201ENSMUST00000198555 1171 ntBASIC31.31■■■□□ 2.6
Chd2E9PZM4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Chd2E9PZM4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC31.31■■■□□ 2.6
Chd2E9PZM4 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Chd2E9PZM4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC31.31■■■□□ 2.6
Chd2E9PZM4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Chd2E9PZM4 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Chd2E9PZM4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Chd2E9PZM4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Chd2E9PZM4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Chd2E9PZM4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC31.28■■■□□ 2.6
Chd2E9PZM4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Chd2E9PZM4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
Chd2E9PZM4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Chd2E9PZM4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC31.27■■■□□ 2.6
Chd2E9PZM4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Chd2E9PZM4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC31.26■■■□□ 2.6
Chd2E9PZM4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC31.26■■■□□ 2.6
Chd2E9PZM4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC31.26■■■□□ 2.6
Chd2E9PZM4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC31.26■■■□□ 2.59
Chd2E9PZM4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC31.26■■■□□ 2.59
Chd2E9PZM4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Chd2E9PZM4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Chd2E9PZM4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC31.24■■■□□ 2.59
Chd2E9PZM4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Chd2E9PZM4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Chd2E9PZM4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Chd2E9PZM4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Chd2E9PZM4 Gm45417-201ENSMUST00000209533 758 ntBASIC31.24■■■□□ 2.59
Chd2E9PZM4 AC140930.3-201ENSMUST00000222935 274 ntBASIC31.24■■■□□ 2.59
Chd2E9PZM4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Chd2E9PZM4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC31.23■■■□□ 2.59
Chd2E9PZM4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Chd2E9PZM4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Chd2E9PZM4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Chd2E9PZM4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Chd2E9PZM4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Chd2E9PZM4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC31.21■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms